| ADE | acute disseminated encephalomyelitis |
| AMPAR1/2 | a-amino-3-hydroxy-5-methylisoxazole-4-propionic acid receptor 1 and 2 |
| ANA | antinuclear antibodies |
| aNAE | the amino (NH2)-terminal of α-enolase |
| APS | autoimmune polyendocrine syndromes |
| BDNF | brain-derived neurotrophic factor |
| Caspr2 | contactin-associated protein 2 |
| CNS | central nervous system |
| EEG | electroencephalography |
| EP | evoked potentials |
| ERP | event-related potentials |
| GABAAR | gamma-aminobutyric acid A receptor |
| HE | Hashimoto encephalopathy |
| HT | Hashimoto’s thyroiditis |
| TGAb | anti-thyroglobulin antibodies |
| TPOAb | anti-thyroid peroxidase antibodies |
| TSHRAb | TSH receptor blocking or stimulating antibodies |
| CIDP | chronic inflammatory demyelinating polyradiculoneuropathy |
| IgG4-RD | IgG4-related disease |
| IVIg | intravenous immunoglobulin |
| mI/Cr | myo-inositol/creatine |
| MRI | magnetic resonance imaging |
| MRS | magnetic resonance spectroscopy |
| MRS | magnetic resonance spectroscopy |
| NAA/Cr | N-acetylaspartate/creatine |
| NAIM | nonvasculitic autoimmune inflammatory meningoencephalitis |
| NMDAR | N-methyl-D-aspartate receptor |
| SPECT | single photon emission computed tomography |
| SREAT | steroid-responsive encephalopathy associated with autoimmune thyroiditis |
| TGA | transient global amnesia |