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. 2001 Feb;183(3):1022–1031. doi: 10.1128/JB.183.3.1022-1031.2001

TABLE 3.

Mapping of sites needed for repression of trbBp by KorB and TrbAa

Reporter plasmid KorBb
TrbAd
Presence (+) or absence (−) of repressor Overnight culture (+ 0.05 mM IPTG)
Logarithmic culture (+ 0.5 mM IPTG)
Presence (+) or absence (−) of repressor Overnight culture (+ 0.05 mM IPTG)
Logarithmic culture (+ 0.5 mM IPTG)
XylE unitsa Rc XylE unitse Rc XylE unitse Rc XylE unitse Rc
pGBT63 + 0.53 24.3 0.053 48.9 + 0.84 18 0.39 3.54
12.9 2.59 15.1 1.38
pGBT66 + 0.21 31.4 0.032 59.6 + 0.81 14.7 0.34 4.3
6.6 1.91 11.9 1.46
pMZT37 + 0.23 22.6 0.025 78.8 + 0.93 12.7 0.25 3
5.2 1.97 11.8 0.74
pMZT38 + 0.22 31.3 0.02 112 + 0.8 14.4 0.23 5.04
6.9 2.24 11.5 1.16
pMZT39 + 0.29 19.3 0.025 96 + 0.99 13.9 0.43 3.6
5.6 2.4 13.8 1.56
pMZT14 + 0.009 38.9 0.0045 37.8 + 0.45 1.0 0.06 1.5
0.35 0.17 0.45 0.09
pMZT40 + 4.22 1.2 0.94 2.6 + 0.77 15.1 0.27 3.9
5.0 2.45 11.6 1.05
pMZT41 + 4.31 1.2 1.1 1.8 + 0.45 17 0.24 5.6
5.1 2.01 7.64 1.34
pMZT42 + 3.27 1.4 0.82 2.1 + 0.93 17.5 0.12 7.3
4.6 1.74 16.3 0.84
a

Results come from at least three experiments. The RK2 DNA present in the reporter plasmids is shown in Fig. 3

b

KorB was expressed by plasmid pDM1.21, while the expression vector pDM1.2 was used to replace it for the no-repressor control. 

c

Repression ratio, calculated as XylE units with repressor/XylE units without repressor. 

d

TrbA was expressed by plasmid pMZT24, while the expression vector pGBT30 was used to replace it for the no-repressor control. 

e

For clarity, the standard deviation values, which were generally in the same range as shown in the other tables, were omitted.