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. 2022 Sep 17;13(9):1665. doi: 10.3390/genes13091665

Table 1.

Details of all datasets used in this study.

Data Description Data Location Reference
Horvath ageing clock Publication suppl. data Horvath (2013) [19]
Levine ageing clock Publication suppl. Data Levine et al. (2018) [24]
Stubbs ageing clock GEO: GSE93957/publication suppl. Data Stubbs et al. (2017) [25]
Meer ageing clock GEO: GSE121141/publication suppl. Data) Meer et al. (2018) [26]
Petkovich ageing clock GEO: GSE80672/publication suppl. Data) Petkovich et al. (2017) [27]
Human G4-seq (K+) GEO: GSM3003539 Marsico et al. (2019) [8]
Mice G4-seq (K+) GEO: GSM3003547 Marsico et al. (2019) [8]
TET1 (mouse ESCs) ChIP-Seq GEO: GSE24841 Williams et al. (2011) [25]
TET2 (mouse ESCs) ChIP-seq GEO: GSE41720 Chen et al. (2013) [26]
TET1 (human ESCs) ChIP-seq GEO: GSE99346 Verma et al. (2018) [27]
DNMT1 (K562) ChIP-seq GEO: GSE92213 ENCODE [28]
DNMT1 (HepG2) ChIP-seq GEO: GSE170872 ENCODE [28]
DNMT3b (HepG2) ChIP-seq GEO: GSE95953 ENCODE [28]
NHEK BG4-ChIP GEO: GSE76688 Hänsel-Hertsch et al. (2016) [9]
HaCaT BG4-ChIP GEO: GSE76688 Hänsel-Hertsch et al. (2016) [9]
K562 BG4-ChIP GEO: GSE107690 Mao et al. (2018) [15]