Table 7.
Nucleotide and amino acid differences found in the complete mtDNA nad1 sequence of Fasciola nyanzae from South Africa.
| F. nyanzae haplotype (H) | Locality* | Host** | GenBank Acc. No. | nad 1 nucleotide sequence | NAD1 amino acid sequence | ||||
|---|---|---|---|---|---|---|---|---|---|
| Variable positions | Length (bp) | AT (%) | Variable positions | Length (aa) | |||||
| 1111111245 | 88 | 1 | |||||||
| 5555666280 | 16 | 555557 | |||||||
| 1489013839 | 94 | 123450 | |||||||
| H nad1-a | S | H.amph | ON661077 | GAATGGGTTC | CC | 903 | 61.35 | G S Y G E A | 300 |
| H nad1-b | S | H.amph | ON661078 | . . . . . . . C . T | . . | 903 | 61.35 | . . . . . V | 300 |
| H nad1-c | S | H.amph | ON661079 | . . . . . . . . CT | T . | 903 | 61.46 | . . . . . V | 300 |
| H nad1-d | K and S | H.amph | ON661080 | . . . . . . . . . T | . . | 903 | 61.46 | . . . . . V | 300 |
| H nad1-e | K | H.amph | ON661081 | TGTGTTC . . T | T . | 903 | 61.68 | WGLLQV | 300 |
| H nad1-f | K | H.amph | ON661082 | TGTGTTCC . T | . . | 903 | 61.46 | WGLLQV | 300 |
| H nad1-g | K | H.amph | ON661083 | TGTGTTC . . T | . . | 903 | 61.57 | WGLLQV | 300 |
Positions = numbers (to be read in vertical) refer to variable positions obtained in the 903-bp-long alignment made with MEGA X; . = identical.
K, Klaserie Private Nature Reserve; S, Sabi Sand Nature Reserve.
H.amph, Hippopotamus amphibius.