Table 1.
The prevalence of BtCoVs in different bat species included in the study. O—oral swabs; F—feces.
| Species | No of Samples | No of Positives rtRT-qPCR | No of Positives nRT-PCR | Total No of Positives | Positives % (95% CI) |
|---|---|---|---|---|---|
| Eptesicus serotinus | 57 | 0 | 0 | 0 | 0% (0.0–6.3) |
| Nyctalus noctula | 79 | 0 | 0 | 0 | 0% (0.0–4.6) |
| Nyctalus leisleri | 3 | 0 | 0 | 0 | 0% (0.0–56.1) |
| Barbastella barbastellus | 55 | 0 | 0 | 0 | 0% (0.0–6.5) |
| Plecotus auritus | 30 | 0 | 0 | 0 | 0% (0.0–11.4) |
| Vespertillo murinus | 12 | 0 | 0 | 0 | 0% (0.0–24.2) |
| Pipistrellus pygmaeus | 29 | 0 | 0 | 0 | 0% (0–11.7) |
| Pipistrellus pipistrellus | 10 | 0 | 0 | 0 | 0% (0–27.8) |
| Pipistrellus spp. | 6 | 0 | 0 | 0 | 0% (0.0–39.0) |
| Pipistrellus nathusii | 19 | 0 | 0 | 0 | 0% (0.0–16.8) |
| Myotis dasycneme | 3 | 0 | 0 | 0 | 0% (0.0–56.1) |
| Myotis daubentonii | 55 | 0 | 2 (F) | 2 (F) | 3.6% (0.6–12.3) |
| Myotis myotis | 4 | 0 | 0 | 0 | 0% (0–49.0) |
| Myotis mystacinus | 6 | 0 | 0 | 0 | 0% (0–39.0) |
| Myotis nattereri | 22 | 0 | 0 | 0 | 0% (0–14.9) |
| Myotis bechsteinii | 8 | 0 | 0 | 0 | 0% (0–32.4) |
| Myotis alcathoe | 1 | 0 | 0 | 0 | 0% (0–94.9) |
| Myotis brandtii | 7 | 0 | 0 | 0 | 0% (0–35.4) |
| Myotis emarginatus | 1 | 0 | 0 | 0 | 0% (0–94.9) |
| Rhinolophus hipposideros | 58 | 18 (14 O; 4 F) | 3 (F) | 18 (14 O; 4 F) | 31% (20.6–43.8) |
| unidentified | 38 | 0 | 0 | 0 | 0% (0.0–9.2) |
| Total | 503 | 20 (14 O; 6 F) | 4.0% (2.6–6.1) |