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. 2021 May 24;37(22):4100–4107. doi: 10.1093/bioinformatics/btab404

Table 1.

Example of a tibble abstraction of a Seurat table

# A Seurat-tibble abstraction: 8033 × 11
# Features = 1000 | Active assay=SCT | Assays=RNA, SCT
Cell Total count Total transcripts PC1 UMAP1 Cluster Cell type
cell_1 10 456 450 −1.23 −3.47 1 T cell
cell_2 2088 400 0.98 −1.59 2 B cell
cell_3 11 309 699 5.55 1.26 5 Monocyte
cell_4 8791 423 −5.42 −4.42 1 Monocyte

Note: Pre-existing cell-wise annotation and newly calculated information are all coexisting in a unique table.