Table 2.
Genomic features of Mortierella sequenced and de novo assembled in this study.
| Species | M. alpina CGMCC 20262 | M. schmuckeri CGMCC 20261 | |
|---|---|---|---|
| Genome size (Mb) | 40.22 | 49.24 | |
| Scaffolds | 28 | 25 | |
| Largest scaffolds (Mb) | 4.35 | 4.78 | |
| GC (%) | 50.92 | 47.46 | |
| N50 (Mb) | 2.53 | 2.71 | |
| L50 | 6 | 8 | |
| Assembly BUSCO coverage (%) | 97.4 | 97.6 | |
| PCG models | 11,761 | 13,051 | |
| Pfam | 8507 | 8636 | |
| NT | 4026 | 4434 | |
| NR | 4904 | 6180 | |
| GO | 5411 | 5571 | |
| Eggnog | 9076 | 9436 | |
| KEGG | 4858 | 4921 | |
| CAZymes | 229 | 222 | |
| Gene clusters of secondary metabolites | |||
| Terpene | 4 | 2 | |
| Fungal-RiPP | 0 | 1 | |
| NRPS | 15 | 0 | |
| NRPS-like | 1 | 2 | |
| Siderophore | 2 | 0 | |
| Repetitive elements (% in genomes) | 7.29 | 7.45 | |
| ncRNA | |||
| rRNA | 38 | 29 | |
| tRNA | 226 | 262 |