| AOC2 | allene oxide cyclase |
| BP | biological process |
| BR | brassinosteroid |
| CAD | cinnamyl alcohol dehydrogenase |
| CaM | calmodulin |
| CAT | catalase |
| CDPK | calcium-dependent protein kinase |
| CH | chloroplast |
| CML | calmodulin-like protein |
| CW | cell wall |
| DAB | diaminobenzidine |
| DEGs | differentially expressed genes |
| DHE | dihydroethidium |
| DW | dry weight |
| Fm | maximum fluorescence |
| Fv | variable fluorescence |
| FW | fresh weight |
| Gl | basal lamellae |
| GO | gene ontology |
| HCT | hydroxycinnamoyl CoA: shikimate hydroxycinnamoyl transferase |
| JA | jasmonic acid |
| JAZ | jasmonate ZIM domain-containing protein |
| KEGG | Kyoto Encyclopedia of Genes and Genomes |
| H2O2 | hydrogen peroxide |
| KOG | clusters of orthologous groups for eukaryotic complete genomes |
| LD | lipid droplet |
| LOX | lipoxygenase |
| LTS | low-temperature stress |
| MAP3K17/18 | mitogen-activated protein kinase kinase kinase 17/18 |
| NR | nonredundant |
| O2·− | superoxide radicals |
| OPR1 | 12-oxophytodienoate acid reductase |
| OXI1 | serine/threonine-protein kinase |
| P | plastid pellet |
| POD | peroxidase |
| qN | nonphotochemical quenching coefficient |
| ROS | reactive oxygen species |
| RT | room temperature |
| SD | standard deviation |
| Sg | starch granule |
| SOD | superoxide dismutase |
| SRA | sequence read archive |
| TCH4 | xyloglucan:xyloglucosyl transferase |
| TEM | transmission electron microscope |
| TF | transcription factors |
| V | volume |
| Va | central large vacuole |
| VIGS | virus-induced gene silencing |
| Y(II) | PSII photochemistry |
| Y(NO) | quantum yield of nonregulated energy dissipation |