Key resources table
REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Antibodies | ||
HRP-conjugated anti-rabbit IgG antibodies at 1:10000 | Kiessling lab; Jackson ImmunoResearch Laboratories | #111-035-003 |
HRP-conjugated anti-rabbit IgG antibodies at 1:2500 | Eisinger lab; Cell Signaling Technology [CST] | #7074 |
anti-Yap1 primary antibodies | Cell Signaling Technology [CST] | #14074, #4912 |
Alexa Fluor 488-conjugated secondary antibodies | Thermo Fisher Scientific | #A-11008 |
Bacterial and virus strains | ||
Biological samples | ||
Chemicals, peptides, and recombinant proteins | ||
BRD-K43796186 (NB4A) | MuseChem | cat. #M189943 |
BRD-K43796186 (NB4A) | Ambinter | cat # Amb2554311 |
8xGTIIC-luciferase | Gift from Stefano Piccolo, Addgene | plasmid # 34615 |
Critical commercial assays | ||
Deposited data | ||
RNA-sequencing data | this paper | GSE198909 |
Compound Dataset | Bray et al., 2017 | DOI: 10.1093/gigascience/giw014 |
Gene Overexpression Dataset | Rohban et al., 2017 | DOI:10.7554/eLife.24060 |
Experimental models: Cell lines | ||
RT112/84 | Cancer Cell Line Encyclopedia (Broad Institute, Cambridge, MA) | |
HEK293T | ATCC | |
Murine KP230 | Eisinger lab | |
STS-109 UPS | Rebecca Gladdy, MD (University of Toronto) | |
TC32 | Patrick Grohar, MD, PhD (Children’s Hospital of Philadelphia) | |
HT-1080 | ATCC | |
HCT-116 | ATCC | |
Experimental models: Organisms/strains | ||
Oligonucleotides | ||
Recombinant DNA | ||
Knockdown of YAP1 in HCT-116 cells | Dharmacon | TRCN0000107266 and TRCN0000107267 |
Software and algorithms | ||
GitHub Repository to reproduce the results | this paper | DOI 10.5281/zenodo.6970733 |
Other | ||