Table 2.

Nrd1-regulated putative defense-related genes and susceptibility genes identified by RNA-seq

Gene class	Gene name	Gene ID	Description	Δnrd1-1/wild-type*	Adjusted P	Δnrd1-2/wild-type*	Adjusted P
Putative defense-related gene (upregulated in nrd1 mutants)	D1	Solyc05g024190	Chlorophyll synthase, chloroplastic	2.857	0.001313	3.846	0.00792
	D2	Solyc07g061790	Heme-binding protein 2-like	4.348	2.45E−05	6.667	2.66E−08
	D3	Solyc02g077330	GDSL esterase/lipase	2.778	0.014041	3.571	0.01104
	D4	Solyc12g009650	Sl proline-rich protein	2.222	6.79E−13	2.326	2.97E−05
	D5	Solyc11g019910	Plant invertase/pectin methylesterase inhibitor superfamily protein	2.128	0.00512	2.632	5.81E−05
	D6	Solyc08g078020	Arabinogalactan (Agp1)	3.125	3.81E−11	3.704	3.40E−09
Putative susceptibility genes (downregulated in nrd1 mutants)	S1	Solyc03g112030	Cytochrome P450	0.312	0.023826	0.415	0.00779
	S2	Solyc02g088210	SPX domain-containing protein 4	0.457	0.000645	0.355	5.14E−09
	S3	Solyc05g007440	ARM repeat superfamily protein	0.289	3.05E−30	0.348	4.42E−19