TABLE 3.
Primers used for amplification and sequencing
| Primer | Purposea | Sequence |
|---|---|---|
| asd | ||
| CJasd1(+) | A, S | GCA-GGT-GGA-AGT-GTG-AGT-G |
| CJasd2(−) | A, S | TTT-GTT-GCA-GCA-CCT-ACA-CG |
| CJasd3(−) | A | ACG-AAT-TTG-ATC-CGC-CAC-AC |
| CJasd4 | A, S | GCC-ATT-GTG-GGT-GCT-ACT-GG |
| CJasd5 | A, S | CGC-TAG-TCA-TTA-AAG-GCA-TAG-G |
| atpA | ||
| CJatpA1(+) | A, S | GAG-AAG-GTT-TAA-AAG-AAG-GTG-C |
| CJatpA2(−) | A, S | TGT-AGC-TTT-AAT-TTG-AGC-AGC |
| ddlA | ||
| CJddla1(+) | A, S | GAT-CAA-TCT-TAT-CCA-TGG-TAG |
| CJddla2(−) | A, S | AGC-CAA-AGA-ACC-AGG-GTT-TG |
| eftS (tsf) | ||
| CJefts1(+) | A, S | AAA-GCA-GAT-AGA-CTT-GCT-GC |
| CJefts2(−) | A, S | TTT-TCA-GGT-TTA-CCT-TGA-GC |
| fumC | ||
| CJfumC1(+) | A, S | TCG-TGC-CAC-TGA-AAT-CAT-GG |
| CJfumC2(−) | A, S | ACC-TAT-GTG-TGG-ATT-TAG-AGC |
| nuoH | ||
| Cjnadh1(+) | A, S | GCA-GCT-ATT-CCT-ATG-CTA-CC |
| CJnadh2(−) | A, S | TTG-ATC-TGG-ACG-CAA-TTG-CG |
| yphC | ||
| CJyphc1(+) | A, S | TAT-CAG-AGT-GGG-TAT-TGT-AGG |
| CJyphc2(−) | A, S | AAT-CAC-TAA-AGG-CAC-ACC-TTC |
a
A, amplification; S, sequencing.