Table 2. Programs of real-time PCR thermocycling condition after serial optimization.
Gene | Initial dentauration °C/time | Denaturation | Annealing | Extension | Number of cycle | Final extention |
---|---|---|---|---|---|---|
bla HSV | 95°C/5 minute | 94/ °C 40 sec | 59/ °C 40 sec | 72/ °C 40 sec | 35 | 72/ °C 40 sec |
Bla TEM | 95°C/5 minute | 94/ °C 40 sec | 59/ °C 40 sec | 72/ °C 40 sec | 30 | 72/ °C 40 sec |
A negative control was included in each run to access specificity of primers and possible contamination. The threshold cycle (Ct) was determined as the PCR cycle at which increased reporter fluorescence above the baseline could be detected.
All samples were run on PCR machine, PCR reaction data were plotted on graphic presentation by Micro software PCR program.