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. 2022 Sep 13;25(10):105135. doi: 10.1016/j.isci.2022.105135
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

ACOX1 Cusabio Cat# PA617998HA01HU
H3K4me3 Abcam Cat# ab8580; RRID:AB_306649
NUDT7 Youngin Frontier N/A
PPARγ Abcam Cat# ab41928; RRID:AB_777392
FABP4 Abcam Cat# ab92501; RRID:AB_10562486
FASN Cell signaling technology Cat# 3180S; RRID:AB_2100796
PMP70 Abcam Cat# ab211533
SCD1 Abcam Cat# ab19862; RRID:AB_445179
H3K4me2 Cell signaling technology Cat#9725; RRID:AB_10205451
H3K27me2 Cell signaling technology Cat#9755; RRID:AB_659841
H3K27me3 Abcam Cat#ab6002; RRID:AB_305237
Histone H3 Cell signaling technology Cat#4499; RRID:AB_10544537

Chemicals, peptides, and recombinant proteins

CellMask™ Orange Plasma membrane Stain Thermo Fisher Scientific C10045
Oil red O Sigma-Aldrich Cat# O0625s
BODIPY493/503 Thermo Fisher Scientific Cat# D3922
BODIPY581/591 Thermo Fisher Scientific Cat# D3861
Filipin Sigma-Aldrich Cat# SAE0088
3rd generation packaging system ABM Cat# LV053
Lentifectin ABM Cat# G074
Lenti-X Concentrator Clontech Cat# PT4421-2

Critical commercial assays

Nuclear/Cytosol Extraction Kit BioVision K266-100
EZ-Triglyceride Quantification Assay Kit DoGen Cat# DG-TGC100
EZ-Free Fatty Acid Assay Kit DoGen Cat # DG-FFA100
EZ-Total Cholesterol Assay Kit DoGen Cat# DG-TSC100
Quick Cell Proliferation Colorimetric Assay Kit BioVision Cat# K302-2500
Catalase Activity Colorimetric/Fluorometric Assay Kit BioVision Cat# K773-100
ChIP-IT Express Kit Active Motif Cat# 53009

Experimental models: Cell lines

HEK-293T ATCC CRL-3216
Hepatocyte This paper N/A

Experimental models: Organisms/strains

Mouse: Nudt7+/−: C57BL/6N Song et al. (2018, NComm) N/A
Mouse: Catalse−/−: C57BL/6N Generously donated by Goo Taeg Oh, Ewha Womans University N/A

Oligonucleotides

See Table S2 for primer sequences.

Software and algorithms

RStudio RStudio https://github.com/rstudio/rstudio
QIAGEN’s Ingenuity Pathway Analysis algorithm (IPA) QIAGEN www.qiagen.com/ingenuity
Gene Set Enrichment Analysis (GSEA) Subramanian, Tamayo, et al. (2005, PNAS) and and Mootha, Lindgren, et al. (2003, Nature Genetics) www.gsea-msigdb.org/gsea