Skip to main content
. 2022 Sep 30;15:206. doi: 10.1186/s12920-022-01362-1

Table 2.

Genetic characteristics of identified mutations in patients

Patient Mutated gene DNA sequence Amino acid change VAF (tissue) VAF
(blood)
Depth (X)
(tissue)
Depth (X)
(blood)
COSMIC ID Biopsy site and lesion
1 PIK3CA c.1636C > A p.Gln546Lys 0.048 0 513 594 COSM766 Right thigh, cutaneous capillary malformation
2 PIK3CA c.2740G > A p.Gly914Arg 0.182 0 765 326 COSM3205660 Left arm, cutaneous capillary malformation
3 PIK3CA c.1345C > A p.Pro449Thr 0.131 0 721 323 COSM18601 Left arm, cutaneous capillary malformation
4 PIK3CA c.1633G > A p.Glu545Lys 0.023 0 633 352 COSM763 Left leg, cutaneous capillary malformation
5 PIK3CA c.1357G > A p.Glu453Lys 0.127 0 1554 398 COSM12584 Left leg, cutaneous capillary malformation
6 PIK3CA c.3073A > G p.Thr1025Ala 0.081 0 1149 314 COSM771 Neck, hemangioma
7 PIK3CA c.2908G > A p.Glu970Lys 0.023 0.036 890 239 COSM94980 Lower leg, cutaneous capillary malformation
8 KRAS c.35G > A p.Gly12Asp 0.041 0 1080 212 COSM521 Right lower leg, skin of overgrowth lesion
9 KRAS c.35G > A p.Gly12Asp 0.058 0 571 391 COSM521 Right lower leg, skin of overgrowth lesion
10 PTEN c.755A > T p.Asp252Val 0.712 0.481 880 281 COSM3368151 Abdomen skin, epidermal nevus
11 MAP2K3 c.696 + 1G > A p.(?) 0.042 0.088 796 341 COSM560209 Left inguinal area, skin of overgrowth lesion
12 GNAQ c.548G > A p.Arg183Gln 0.039 0 1038 248 COSM52975 Right flank area, nevus flammeus
13 TBC1D4 c.667G > A p.Asp223Asn 0.026 0 952 273 COSM6797461 Right lower leg, skin of overgrowth lesion
14 TEK c.3324_3334del p.Glu1109Leufs Ter5 0.046 0 544 567 Left buttock, skin of overgrowth lesion
15 Not found 1074 322 Abdomen, cutaneous capillary malformation

VAF, variant allele frequency; COSMIC, Catalogue of Somatic Mutations in Cancer