Table 1.
Summary of the datasets used to compare binners
| Datasets | Total size (Gbp) | Reads N50 (kbp) | Assembly length (Gbp) | Contigs N50 (kbp) | Mean cov. | Contigs | Edges | Samples |
|---|---|---|---|---|---|---|---|---|
| Strong100 | 7.5 | 13.3 | 0.17 | 175.0 | 42 | 852 | 670 | 1 |
| Hjor | 16.0 | 8.7 | 0.86 | 80.4 | 13 | 19 496 | 5937 | 4 |
| Viby | 17.2 | 14.0 | 1.32 | 101.0 | 7 | 23 389 | 7800 | 4 |
| Damh | 26.7 | 14.3 | 1.93 | 119.0 | 8 | 32 771 | 14 066 | 4 |
| Mari | 23.3 | 10.1 | 1.69 | 83.1 | 8 | 36 611 | 12 651 | 4 |
| AalE | 27.7 | 10.2 | 1.92 | 83.4 | 8 | 40 827 | 12 425 | 4 |
| Hade | 45.2 | 9.8 | 3.01 | 73.9 | 9 | 70 402 | 27 952 | 4 |
| Soil | 115.0 | 7.7 | 1.98 | 93.3 | 19 | 51 135 | 69 522 | 1 |
Note: Total size refers to the total number of base pairs in the dataset. Reads N50 is the N50 length of reads. Assembly length refers to the sum of the length of all contigs. Contig N50 is the N50 value for contigs. Mean cov. refers to the mean base coverage of all contigs. Contigs and edges refers to the number of contigs of each assembly and edges in the assembly graph. Samples is the number of samples available to calculate abundance.