Table 6.
Binding affinities of lead compounds (score as kcalorie/mole) and residue interactions to HγD NC-tail spanning domain
| NC-tail binding sites (12 MAC binding sites indicated in bold) | |||||||||||||||||||||||||||||
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| B | −6.3 | X | X | X | X | X | X | X | X | X | X | X | X | X | |||||||||||||||
| C(S) | −6.8 | X | X | X | X | X | X | X | X | X | X | ||||||||||||||||||
| C(R) | −8.4 | X | X | X | X | X | X | X | X | X | X | X | |||||||||||||||||
| G | −6.4 | X | X | X | X | X | X | X | X | ||||||||||||||||||||
| H | −7.6 | X | |||||||||||||||||||||||||||
| M | −4.0 | X | X | X | X | X | X | X | X | X | |||||||||||||||||||
| X | −5.8 | X | X | X | X | X | |||||||||||||||||||||||
| Bis-ANS | −7.1 | X | X | X | X | X | X | X | X | X | X | X | X | ||||||||||||||||
Note: Drug X has additional binding sites at residues P83, H84, G86, S87, H88, and R89. Residues that are shared with MAC binding sites are in bold.