Table 6.
The effect of 3′ UTR variants of TCF4 and CACNA1C on miRNA binding sites.
Gene | miRNA | SNP | Effect | Allele | Energy | Conservation |
---|---|---|---|---|---|---|
TCF4 | Hsa-miR-105-3p | rs1261084 | Create | C | ||
T | -18.66 | 0.002 | ||||
TCF4 | Hsa-miR-356 | rs1261084 | Break | C | -22.47 | 0.002 |
T | ||||||
TCF4 | Hsa- miR-3151 | rs1261084 | Enhance | C | -23.24 | 0.036 |
T | -22.26 | 0.036 | ||||
TCF4 | Hsa- miR-3180 | rs1261084 | Enhance | C | -19.77 | 0.028 |
T | -21.15 | 0.028 | ||||
CACNA1C | Hsa- miR-561-3p | rs10466907 | Create | T | -6.39 | 0.040 |
G |
SNP: single-nucleotide polymorphism; miRNA: microRNA.