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. Author manuscript; available in PMC: 2022 Oct 3.
Published in final edited form as: Stat Methods Med Res. 2021 Nov 24;31(3):510–519. doi: 10.1177/09622802211055854

Table 1.

The rejection rates of testing for subtype heterogeneity of driver genes under a variety of parameter settings. The rows are organized by the background mutation rates (λ), the proportion of subgroups (a), and the effect size of log-scaled selection pressure parameter (β0). The columns are organized by the effect size of subtype heterogeneity (γ). The rejection rates higher than 0.8 are highlighted.

0 γ
log2 log4 log6 log8 log10
λ 10 × 10−7 0.00 0.41 0.85 0.93 0.95 0.99
5 × 10−7 0.00 0.17 0.60 0.79 0.88 0.92
2.5 × 10−7 0.01 0.04 0.35 0.51 0.64 0.73
a 0.1 0.01 0.01 0.26 0.44 0.58 0.71
0.3 0.00 0.23 0.71 0.86 0.93 0.95
0.5 0.00 0.38 0.84 0.94 0.97 0.99
β 0 log5 0.02 0.02 0.25 0.40 0.54 0.66
log10 0.00 0.11 0.49 0.71 0.80 0.87
log15 0.00 0.21 0.67 0.83 0.89 0.91
log20 0.00 0.31 0.76 0.88 0.92 0.98
log25 0.00 0.39 0.84 0.90 0.98 0.99