Table 1.
The rejection rates of testing for subtype heterogeneity of driver genes under a variety of parameter settings. The rows are organized by the background mutation rates (λ), the proportion of subgroups (a), and the effect size of log-scaled selection pressure parameter (β0). The columns are organized by the effect size of subtype heterogeneity (γ). The rejection rates higher than 0.8 are highlighted.
0 |
γ
|
||||||
---|---|---|---|---|---|---|---|
log2 | log4 | log6 | log8 | log10 | |||
λ | 10 × 10−7 | 0.00 | 0.41 | 0.85 | 0.93 | 0.95 | 0.99 |
5 × 10−7 | 0.00 | 0.17 | 0.60 | 0.79 | 0.88 | 0.92 | |
2.5 × 10−7 | 0.01 | 0.04 | 0.35 | 0.51 | 0.64 | 0.73 | |
a | 0.1 | 0.01 | 0.01 | 0.26 | 0.44 | 0.58 | 0.71 |
0.3 | 0.00 | 0.23 | 0.71 | 0.86 | 0.93 | 0.95 | |
0.5 | 0.00 | 0.38 | 0.84 | 0.94 | 0.97 | 0.99 | |
β 0 | log5 | 0.02 | 0.02 | 0.25 | 0.40 | 0.54 | 0.66 |
log10 | 0.00 | 0.11 | 0.49 | 0.71 | 0.80 | 0.87 | |
log15 | 0.00 | 0.21 | 0.67 | 0.83 | 0.89 | 0.91 | |
log20 | 0.00 | 0.31 | 0.76 | 0.88 | 0.92 | 0.98 | |
log25 | 0.00 | 0.39 | 0.84 | 0.90 | 0.98 | 0.99 |