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. 2022 Sep;32(9):1698–1710. doi: 10.1101/gr.276375.121

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© 2022 Matthey-Doret et al.; Published by Cold Spring Harbor Laboratory Press

This article is distributed exclusively by Cold Spring Harbor Laboratory Press for the first six months after the full-issue publication date (see https://genome.cshlp.org/site/misc/terms.xhtml). After six months, it is available under a Creative Commons License (Attribution-NonCommercial 4.0 International), as described at http://creativecommons.org/licenses/by-nc/4.0/.

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Figure 4. — Changes in trans-chromosomal contacts between A. castellanii chromosomes following L. pneumophila infection. (A) Average contact change during infection between each pair of chromosomes. Chromosome lengths are shown below the interaction matrix, with the chromosome bearing 18S and 28S rDNA highlighted in green. (B) Representative intertelomeric contacts between a pair of chromosomes (C3 scaffolds 3 and 11). The average intertelomeric contact profile generated from all pairs of chromosomes is shown as a pileup. The log ratio between the infected (I) and uninfected (U) profiles is shown as a ratio (right).