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. 2022 Oct 4;187(5-6):535–546. doi: 10.1007/s11046-022-00669-y

Table 2.

Patents for diagnostic and detection of Candida auris

Applicant Number/
Reference
Country Year Indication Application Method/Primers
1

WO2020114998 (A1)

[26]

US 2020 To identify C. auris Real time PCR assay to detect 5.8S/ITS2 gene in biological and non biological samples

SEQ ID NO 1: CAUROOl forward primer T G AGCGT GAT GT CTT CT C AC

SEQ ID NO 2: CAUR003 forward primer GAGCGTGATGTCTTCTCACC

SEQ ID NO 3: CAUR005 forward primer ACT G ATTT GG ATTTT A A A ACT A ACCC A A SEQ ID NO 4 CAUR007 forward primer AACT AACCCAACGTTAAGTT CAAC

SEQ ID NO 5: CAUR002 reverse primer CCTGATTTGAGGCGACAACAA

SEQ ID NO 6: CAUR004 reverse primer CGT CTGC A AGT CAT ACT ACGT A

SEQ ID NO 7: CAUR006 reverse primer CGATGATTCACGTCTGCAAGTC

SEQ ID NO 8: CAUR008 reverse primer CAACGCCACCGCGAA

SEQ ID NO 9: CAUR101HQ6 probe CTTCGCGGTGGCGTTGCATTCACA

SEQ ID NO 10: CAUR103HQ6 probe TT CGCGGT GGCGTTGCATT CACA

SEQ ID NO 11: CAUR105HQ10 probe ACA ACGG AT CT CTT GGTTCT CGC AT CG ATG

SEQ ID NO 12: CAUR107HQ8 probe CTCGCATCGATGAAGAACGCAGCGAAA

2

CN110951905 (A)

[27]

China 2020 To identify C. auris LAMP method to Identify C. auris

The primer set includes an outer primer, an inner primer and a loop primer, and the outer primer is SEQ ID NO: 1 to SEQ ID. NO: 2, the inner primers are SEQ ID NO: 3 to SEQ ID NO: 4, and the loop primers are SEQ ID NO: 5 to SEQ ID NO: 6

External primer Cau416-F3: 5'-CCATGCTAACCCTGAAACT-3' (SEQ ID NO: 1)

Outer primer Cau416-B3: 5'-CGAAGATACCACAACAACC-3' (SEQ ID. NO: 2)

Inner primer Cau416-FIP: 5’-GGCCTTGGAGATGACACCATTTTTGTCGCTTTTGGTGCTC-3’ SEQ ID NO: 3)

5’-CTCCTGTTGGTTTGGTTAAGGTCAGTTGCGTGCAGACGAAGG-3’ (SEQ ID NO: 4) loop primer

Cau416-LF1: 5’-GCAAGCTCAGTAGCCTGGT-3’ (SEQ ID NO: 5)

Loop primer Cau416-LB1-2: 5'-TTCCCATTTGCTCAAGAACACT-3' (SEQ ID NO: 6)

3 CN110408720 (A) [28] China 2020 To identify C. auris and distinguish it from similar species High-resolution-ratio melting curve

Upstream primer is 5'-CGTAGTATGACTTGCAGACG-3'

Downstream primer is 5'-GCGGGTAGTCCTACCTGAT-3'

4 ES2763043 (A1); ES2763043 (B2) [29] Spain 2020 To detect and/or quantify of C. auris Biosensor

SEQ ID NO: 2 (5'-TTTTGGGGGGTACGCAAGGCGAATCTACCCGGGGGGTTTT-3 ') or the nucleotide sequence SEQ ID NO: 3 (5'-TTTCTGTGTGTC 3' -TTCTGTGTGTC)

EQ ID NO: 2 and SEQ ID NO: 3 specifically recognizes the region 892,198 to 892,217 of chromosome 2 of C. auris DNA, and the region 1,056,775 to 1,056,787 of chromosome 3 of C. auris gene respectively

These sequences are specific for C. auris and do not exist in other pathogenic organisms guaranteeing the specificity of the biosensor for C. auris

5 US2020291488 (A1) [30] US 2020

To detect the presence of a

C. auris in a biological or environmental sample

T2MR 5′-CTA CCT GAT TTG AGG CGA CAA CAA AAC-3′ (SEQ ID NO: 4) and the second probe includes the oligonucleotide sequence: 5′-CCG CGA AGA TTG GTG AGA AGA CAT-3′ (SEQ ID NO: 5)
6 US10870829 (B2); US2020270567 (A1) [31] US 2020

To ident and differentiate

C. auris from another Candida spp

Identification of C. auris based on the sensitivity to certain compounds

Medium based on the positive selection system: Growth at Quaternary Ammonium Compound at 37-38ºC;

Medium based on the negative selection system: Growth of C. auris based on distinctive sensitive to tert-butyl-hydroperoxide

7 CN110551840 (A) [32] China 2019

Rapid and accurate screening to detect

C. auris

Nucleic acid reagent, kit, system, and method for detecting invasive fungi Code probe sequence: C-au C-au-P ROX-tgtcgttattgttactactgactctgacggttc-BHQ2
8 CN112041441 (A) [33] China 2020

To detect

C. auris from a specimen

LAMP method

The primers (FIP, BIP, F3, B3) and loop primers (loop-B, loop-F) are based on the specific bases of C. auris suitable for the LAMP method:

FIP: AGGCTACTGAGCTTGCTGGTGTAACCAAACCAACAGGAGAGG

BIP: ACGGTTTCAGGGTTAGCATGGCTCAACAAAGTCGCTGGTACA

F3: GGGAAAGGAACCCTGACCT

B3: GGACACAGCATTCGAAGTGT

Ring-B: CACATACTCGAACGGAGTC

Ring-F: CATCTCGAAGGCCTCGGT

9 CN110804671 (A) [34] China 2020 To identify C. auris rDNA (ITS) target genes as biomarkers for C. auris

Upstream primer C. auris: 5’-TGATGTCTTCTCACCMATCTTC-3’

Downstream primer C. auris: 5’-TGAGGCGACACAAAACG-3’

TaqManProbe: 5'FAM-AATCTTCGCGGTGGCGTTGCATTCA-TAMRA 3'

10

JP2021122236A

[35]

Japan 2021 To identify C. auris Culture medium that enables a quick and convenient check for the presence of C. auris Screening medium containing an enzyme substrate contains raffinose and xylose

US: United State, Loop-mediated isotherm amplification (LAMP), T2 magnetic resonance T2MR