Table 2.
Patents for diagnostic and detection of Candida auris
| Applicant Number/ Reference |
Country | Year | Indication | Application | Method/Primers | |
|---|---|---|---|---|---|---|
| 1 |
WO2020114998 (A1) [26] |
US | 2020 | To identify C. auris | Real time PCR assay to detect 5.8S/ITS2 gene in biological and non biological samples |
SEQ ID NO 1: CAUROOl forward primer T G AGCGT GAT GT CTT CT C AC SEQ ID NO 2: CAUR003 forward primer GAGCGTGATGTCTTCTCACC SEQ ID NO 3: CAUR005 forward primer ACT G ATTT GG ATTTT A A A ACT A ACCC A A SEQ ID NO 4 CAUR007 forward primer AACT AACCCAACGTTAAGTT CAAC SEQ ID NO 5: CAUR002 reverse primer CCTGATTTGAGGCGACAACAA SEQ ID NO 6: CAUR004 reverse primer CGT CTGC A AGT CAT ACT ACGT A SEQ ID NO 7: CAUR006 reverse primer CGATGATTCACGTCTGCAAGTC SEQ ID NO 8: CAUR008 reverse primer CAACGCCACCGCGAA SEQ ID NO 9: CAUR101HQ6 probe CTTCGCGGTGGCGTTGCATTCACA SEQ ID NO 10: CAUR103HQ6 probe TT CGCGGT GGCGTTGCATT CACA SEQ ID NO 11: CAUR105HQ10 probe ACA ACGG AT CT CTT GGTTCT CGC AT CG ATG SEQ ID NO 12: CAUR107HQ8 probe CTCGCATCGATGAAGAACGCAGCGAAA |
| 2 |
CN110951905 (A) [27] |
China | 2020 | To identify C. auris | LAMP method to Identify C. auris |
The primer set includes an outer primer, an inner primer and a loop primer, and the outer primer is SEQ ID NO: 1 to SEQ ID. NO: 2, the inner primers are SEQ ID NO: 3 to SEQ ID NO: 4, and the loop primers are SEQ ID NO: 5 to SEQ ID NO: 6 External primer Cau416-F3: 5'-CCATGCTAACCCTGAAACT-3' (SEQ ID NO: 1) Outer primer Cau416-B3: 5'-CGAAGATACCACAACAACC-3' (SEQ ID. NO: 2) Inner primer Cau416-FIP: 5’-GGCCTTGGAGATGACACCATTTTTGTCGCTTTTGGTGCTC-3’ SEQ ID NO: 3) 5’-CTCCTGTTGGTTTGGTTAAGGTCAGTTGCGTGCAGACGAAGG-3’ (SEQ ID NO: 4) loop primer Cau416-LF1: 5’-GCAAGCTCAGTAGCCTGGT-3’ (SEQ ID NO: 5) Loop primer Cau416-LB1-2: 5'-TTCCCATTTGCTCAAGAACACT-3' (SEQ ID NO: 6) |
| 3 | CN110408720 (A) [28] | China | 2020 | To identify C. auris and distinguish it from similar species | High-resolution-ratio melting curve |
Upstream primer is 5'-CGTAGTATGACTTGCAGACG-3' Downstream primer is 5'-GCGGGTAGTCCTACCTGAT-3' |
| 4 | ES2763043 (A1); ES2763043 (B2) [29] | Spain | 2020 | To detect and/or quantify of C. auris | Biosensor |
SEQ ID NO: 2 (5'-TTTTGGGGGGTACGCAAGGCGAATCTACCCGGGGGGTTTT-3 ') or the nucleotide sequence SEQ ID NO: 3 (5'-TTTCTGTGTGTC 3' -TTCTGTGTGTC) EQ ID NO: 2 and SEQ ID NO: 3 specifically recognizes the region 892,198 to 892,217 of chromosome 2 of C. auris DNA, and the region 1,056,775 to 1,056,787 of chromosome 3 of C. auris gene respectively These sequences are specific for C. auris and do not exist in other pathogenic organisms guaranteeing the specificity of the biosensor for C. auris |
| 5 | US2020291488 (A1) [30] | US | 2020 |
To detect the presence of a C. auris in a biological or environmental sample |
T2MR | 5′-CTA CCT GAT TTG AGG CGA CAA CAA AAC-3′ (SEQ ID NO: 4) and the second probe includes the oligonucleotide sequence: 5′-CCG CGA AGA TTG GTG AGA AGA CAT-3′ (SEQ ID NO: 5) |
| 6 | US10870829 (B2); US2020270567 (A1) [31] | US | 2020 |
To ident and differentiate C. auris from another Candida spp |
Identification of C. auris based on the sensitivity to certain compounds |
Medium based on the positive selection system: Growth at Quaternary Ammonium Compound at 37-38ºC; Medium based on the negative selection system: Growth of C. auris based on distinctive sensitive to tert-butyl-hydroperoxide |
| 7 | CN110551840 (A) [32] | China | 2019 |
Rapid and accurate screening to detect C. auris |
Nucleic acid reagent, kit, system, and method for detecting invasive fungi | Code probe sequence: C-au C-au-P ROX-tgtcgttattgttactactgactctgacggttc-BHQ2 |
| 8 | CN112041441 (A) [33] | China | 2020 |
To detect C. auris from a specimen |
LAMP method |
The primers (FIP, BIP, F3, B3) and loop primers (loop-B, loop-F) are based on the specific bases of C. auris suitable for the LAMP method: FIP: AGGCTACTGAGCTTGCTGGTGTAACCAAACCAACAGGAGAGG BIP: ACGGTTTCAGGGTTAGCATGGCTCAACAAAGTCGCTGGTACA F3: GGGAAAGGAACCCTGACCT B3: GGACACAGCATTCGAAGTGT Ring-B: CACATACTCGAACGGAGTC Ring-F: CATCTCGAAGGCCTCGGT |
| 9 | CN110804671 (A) [34] | China | 2020 | To identify C. auris | rDNA (ITS) target genes as biomarkers for C. auris |
Upstream primer C. auris: 5’-TGATGTCTTCTCACCMATCTTC-3’ Downstream primer C. auris: 5’-TGAGGCGACACAAAACG-3’ TaqManProbe: 5'FAM-AATCTTCGCGGTGGCGTTGCATTCA-TAMRA 3' |
| 10 |
JP2021122236A [35] |
Japan | 2021 | To identify C. auris | Culture medium that enables a quick and convenient check for the presence of C. auris | Screening medium containing an enzyme substrate contains raffinose and xylose |
US: United State, Loop-mediated isotherm amplification (LAMP), T2 magnetic resonance T2MR