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Database sizes and processing times of three methods to search for RNA viruses in FLDS data.
| Data | Tool | Database Type | Database Size (GB) | Speed |
|---|---|---|---|---|
| NeoRdRp-HMM/ NeoRdRp-Seq |
hmmsearch/ BLASTp |
HMM/ blast |
0.36/ 0.02 |
1 min 2 s/ 2 min 56 s |
| RVDB-prot | hmmsearch | HMM | 1.61 | 7 min 11 s |
| VirSorter2 | VirSorter2 | VS2 | 11.13 | 11 min 45 s |
