Table 1.
# Chr | Chr size (bp) | No. of Contigs forming Chr | GC content (%) | Repeats (%) | CDS length (%) | Coding sequences (%) | CDS count | No. of ORFs |
---|---|---|---|---|---|---|---|---|
Chr1 | 97 805 473 | 5 | 38.25 | 60.54 | 5 571 716 | 5.7 | 4960 | 35 951 |
Chr2 | 103 193 853 | 6 | 38.08 | 58.85 | 6 091 080 | 5.9 | 5351 | 36 623 |
Chr3 | 99 967 245 | 4 | 38.14 | 52.55 | 5 773 374 | 5.78 | 5066 | 36 000 |
Chr4 | 58 378 603 | 2 | 38.18 | 103.76 | 3 154 452 | 5.4 | 2824 | 22 667 |
Chr5 | 86 516 636 | 4 | 38.22 | 48.46 | 4 797 374 | 5.55 | 4367 | 31 021 |
Chr6 | 66 589 920 | 3 | 38.05 | 80.1 | 3 519 561 | 5.29 | 3122 | 24 855 |
Chr7 | 84 298 359 | 3 | 38.25 | 50.29 | 4 358 578 | 5.17 | 3862 | 32 023 |
Chr8 | 65 456 480 | 6 | 38.07 | 52.86 | 3 330 112 | 5.09 | 3058 | 23 921 |
Chr9 | 53 798 904 | 2 | 37.9 | 62.16 | 2 892 269 | 5.38 | 2667 | 20 190 |
Chr10 | 51 931 824 | 5 | 38.14 | 63.65 | 2 600 983 | 5.01 | 2450 | 21 024 |
Chr11 | 55 055 587 | 5 | 38.15 | 66.74 | 2 926 018 | 5.31 | 2601 | 20 696 |
Chr12 | 50 913 815 | 3 | 38.15 | 66.93 | 2 378 917 | 4.67 | 2153 | 25 008 |
Chr0 | 39 081 123 | 1015 | 49.27 | 74.75 | 5 859 891 | 14.99 | 6434 | 47 033 |
Total 12 Chr | 873 906 699 | 48 | 38.14 | 62.09 | 47 394 434 | 5.42 | 42 481 | 329 979 |
Supplementary Tools S1: list of tools/softwares used.