| Antibodies |
|
| H3K27ac |
Active Motif |
cat# 39133, lot 01613007; RRID: AB_2793305 |
|
| Biological samples |
|
| Fetal and embryonic human heart samples |
Human Developmental Biology Resource at Newcastle University (hdbr.org) |
N/A |
| Healthy adult and DCM hearts |
This paper |
N/A |
|
| Critical commercial assays |
|
| ChIP clean |
Zymo Research |
D5205 |
| TruSeq library preparation kit |
Illumina |
IP-202-1012 |
| TURBO DNA-free Kit |
Life Technologies |
AM1907 |
| Qubit dsDNA HS Assay Kit |
Life Technologies |
Q32851 |
| TruSeq Stranded Total RNA with Ribo-Zero Human/Mouse/Rat kit |
Illumina |
20020597 |
|
| Deposited data |
|
| Raw and analyzed data |
This paper |
GEO: GSE126573
|
|
| Experimental models: Organisms/strains |
|
| Mouse: FVB |
The Jackson Laboratory |
RRID:IMSR_JAX:001800 |
|
| Recombinant DNA |
|
| Plasmid: Hsp68-promoter-LacZ |
Pennacchio et al. Nature. 2006
|
Addgene Plasmid # 37843 |
|
| Software and algorithms |
|
| ENCODE Uniform Processing Pipelines |
N/A |
https://www.encodeproject.org/pipelines
|
| MACS 2.0 |
Zhang et al. (2008)
|
N/A |
| DiffBind |
Ross-Innes et al. (2012)
|
https://bioconductor.org/packages/release/bioc/html/DiffBind.html
|
| GREAT |
McLean et al. (2010)
|
http://great.stanford.edu/public/html/
|
| HOMER |
Heinz et al. (2010)
|
http://homer.ucsd.edu/homer/
|
| PANTHER |
Thomas et al. (2003)
|
http://pantherdb.org/
|
|
| Other |
|
| Resource website for the publication |
This paper |
heart.lbl.gov
|
