TABLE 3.
The 30 most strongly hydrogen peroxide-induced genes in the ΔoxyR strain
| Gene | b no. | Induction ratioa | Functionb |
|---|---|---|---|
| yfiA | b2597 | 109 | Function unknown |
| ibpB | b3686 | 54 | Chaperone, heat-inducible protein of HSP20 family |
| ibpA | b3687 | 35 | Chaperone, heat-inducible protein of HSP20 family |
| tnaA | b3708 | 30 | Tryptophanase |
| yjiD | b4326 | 29 | Function unknown |
| cysK | b2414 | 25 | Cysteine synthase |
| uxuA | b4322 | 23 | Mannonate hydrolase |
| dsdX | b2365 | 22 | Homology with gluconate permease |
| ytfK | b4217 | 20 | Function unknown |
| recN | b2616 | 20 | Recombination and repair |
| soxS | b4062 | 19 | Regulatory protein of soxRS regulon |
| dsdA | b2366 | 18 | d-Serine deaminase |
| fpr | b3924 | 18 | Ferredoxin NADP+ reductase |
| ymgB | b1166 | 17 | Function unknown |
| yeeD | b2012 | 17 | Function unknown |
| ygaQ | b2654 | 17 | Function unknown |
| yaiA | b0389 | 16 | Function unknown |
| yceP | b1060 | 16 | Function unknown |
| glgS | b3049 | 15 | Glycogen synthesis protein |
| ydcH | b1426 | 15 | Function unknown |
| tnaL | b3707 | 15 | Regulatory leader peptide for tna operon |
| phoH | b1020 | 14 | Member of pho regulon |
| ymgA | b1165 | 14 | Function unknown |
| ydeN | b1498 | 14 | Function unknown |
| sbp | b3917 | 12 | Periplasmic sulfate binding protein |
| ynaF | b1376 | 12 | Function unknown |
| cysP | b2425 | 12 | Periplasmic sulfate binding protein |
| yaeH | b0163 | 12 | Function unknown |
| manX | b1817 | 11 | Mannose phosphotransferase system |
| ycgK | b1178 | 10 | Function unknown |
a
Ratio of transcript levels for hydrogen peroxide-treated ΔoxyR (GSO77) strain to transcript levels for untreated ΔoxyR strain.
b
Function descriptions are taken from http://genolist.pasteur.fr/Colibri/.