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. 2022 Sep 22;16:884245. doi: 10.3389/fninf.2022.884245

TABLE 1.

Synaptic properties, s-type, p-type, and rules for each class of connections implemented in NetPyNE.

# BBP id s-Type p-Type gsyn (nS) τdecay (ms) U D (ms) F (ms) Pre- and post-syn cell type rules
0 0 I1 II 0.83 ± 0.55 10.40 ± 6.10 0.16 ± 0.100 45 ± 21 376 ± 253 L6:L6_(DBC-LBC-NBC-SBC)
1 3 I1 IE 0.91 ± 0.61 10.40 ± 6.10 0.16 ± 0.100 45 ± 21 376 ± 253 SBC_cAC:Exc or L6_(NBC-LBC):L6_BPC
2 13 I1 IE 0.75 ± 0.32 10.40 ± 6.10 0.41 ± 0.212 162 ± 69 690 ± 5 L6_MC:L6_IPC
3 1 I2 II 0.83 ± 0.55 8.30 ± 2.20 0.25 ± 0.130 706 ± 405 21 ± 9 L1:Excitatory or Inhibitory:Inhibitory
4 4 I2 IE 0.91 ± 0.61 8.30 ± 2.20 0.25 ± 0.130 706 ± 405 21 ± 9 SBC_dNAC:Excitatory
5 8 I2 IE 0.75 ± 0.32 8.30 ± 2.20 0.25 ± 0.130 706 ± 405 21 ± 9 BTC-DBC-BP:Excitatory
6 9 I2 IE 0.75 ± 0.32 8.30 ± 2.20 0.30 ± 0.080 1,250 ± 520 2 ± 4 MC:Excitatory
7 10 I2 IE 0.91 ± 0.61 8.30 ± 2.20 0.14 ± 0.050 875 ± 285 22 ± 5 LBC-NBC_(bAC cAC bNAC dNAC):Excitatory
8 12 I2 IE 2.97 ± 0.95 8.30 ± 2.20 0.25 ± 0.130 706 ± 405 21 ± 9 Chc:Excitatory
9 5 I3 IE 0.91 ± 0.61 6.44 ± 1.70 0.32 ± 0.140 144 ± 80 62 ± 31 SBC_bNAC or LBC-NBC_(cNAC dSTUT cSTUT bSTUT):Excitatory
10 11 I3 IE 0.83 ± 0.55 36.55 ± 0.71 0.25 ± 0.130 706 ± 405 21 ± 9 NGC:Excitatory
11 114 E1 EI 0.43 ± 0.28 1.74 ± 0.18 0.02 ± 0.001 194 ± 10 507 ± 20 Exc:(BP_cAC DBC_cAC BTC_cAC)
12 115 E1 EI 0.72 ± 0.50 1.74 ± 0.18 0.02 ± 0.001 194 ± 10 507 ± 20 Exc:(NBC-LBC)_(cAC cIR bAC bIR cNAC)
13 132 E1 EI 0.72 ± 0.50 1.74 ± 0.18 0.01 ± 0.001 242 ± 15 563 ± 32 L6_TPC_L:L6_(DBC-LBC-NBC-SBC)
14 133 E1 EI 0.11 ± 0.08 1.74 ± 0.18 0.09 ± 0.120 138 ± 211 670 ± 830 Excitatory:MC
15 116 E2 EE 0.72 ± 0.50 1.74 ± 0.18 0.50 ± 0.020 671 ± 17 17 ± 5 Excitatory:Excitatory
16 117 E2 EI 0.43 ± 0.28 1.74 ± 0.18 0.50 ± 0.020 671 ± 17 17 ± 5 Excitatory:[L1-BP_(cNAC bNAC)-DBC_bAC-BTC_(bAC cNAC bIR)]
17 118 E2 EI 0.72 ± 0.50 1.74 ± 0.18 0.50 ± 0.020 671 ± 17 17 ± 5 Excitatory:SBC-ChC
18 119 E2 EE 0.68 ± 0.46 1.74 ± 0.18 0.46 ± 0.260 671 ± 17 17 ± 5 L23_PC:L23_PC
19 120 E2 EE 0.68 ± 0.46 1.74 ± 0.18 0.86 ± 0.049 671 ± 17 17 ± 5 L4_Excitatory:L4_Excitatory
20 121 E2 EE 0.19 ± 0.12 1.74 ± 0.18 0.79 ± 0.040 671 ± 17 17 ± 5 L4_SS:L23_PC
21 122 E2 EE 0.80 ± 0.53 1.74 ± 0.18 0.39 ± 0.030 671 ± 17 17 ± 5 L5_STPC:L5_STPC
22 123 E2 EE 1.50 ± 1.05 1.74 ± 0.18 0.50 ± 0.020 671 ± 17 17 ± 5 L5_TTPC:L5_TTPC
23 127 E2 EE 0.80 ± 0.53 1.74 ± 0.18 0.39 ± 0.134 780 ± 54 51 ± 36 L6_IPC:L6_IPC
24 131 E2 EI 0.72 ± 0.50 1.74 ± 0.18 0.58 ± 0.070 240 ± 43 71 ± 47 L6_IPC:L6_(DBC-LBC-NBC-SBC)
25 134 E2 EI 0.72 ± 0.50 1.74 ± 0.18 0.72 ± 0.065 227 ± 38 14 ± 12 Exc:(NBC-LBC)_(bSTUT dNAC bNAC cSTUT)
26 126 E3 EE 0.80 ± 0.53 1.74 ± 0.18 0.21 ± 0.032 460 ± 53 230 ± 69 L6_TPC_L:L6_TPC_L
27 128 E3 EE 0.80 ± 0.53 1.74 ± 0.18 0.27 ± 0.033 559 ± 238 200 ± 92 L6_IPC:L6_BPC
28 129 E3 EE 0.80 ± 0.53 1.74 ± 0.18 0.22 ± 0.053 535 ± 134 116 ± 81 L6_IPC:L6_TPC_L

s-type, type of short-term dynamics; p-type, type of projection; gsyn, peak conductance (ms); τdecay, decay time (ms); U, neurotransmitter release probability; D, time constant for recovery from depression (ms); F, time constant for recovery from facilitation (ms). Values indicate mean ± standard deviation.