Table 4.
The antibiotic resistance genes among the Stenotrophomonas acidaminiphila strains.
| Genes | SINDOREI | SUNEO | ZAC14D2_NAIMI4_2 | T25-65 | T0-18 | JCM13310 |
|---|---|---|---|---|---|---|
| Trimethoprim/sulfamethoxazole resistance gene | ||||||
| sul1 | JNIIIPNH_01405 | B1L07_06465 | AOT14_RS07185 | F0P98_RS10870 | F0P95_RS03720 | ABB33_13125 |
| sul2 | JNIIIPNH_01524 | – | – | F0P98_RS10870 | F0P95_RS03720 | – |
| dfrA | JNIIIPNH_02899 | – | AOT14_RS14395 | F0P98_RS03500 | F0P95_RS17150 | – |
| Fluoroquinolone resistance gene | ||||||
| qnr | JNIIIPNH_03313 | B1L07_15000 | AOT14_RS17045 | F0P98_RS16470 | F0P95_RS02400 | – |
| β-lactam resistance gene | ||||||
| L1 | JNIIIPNH_02567 | B1L07_11340 | AOT14_RS12805 | F0P98_RS05130 | F0P95_RS15250 | ABB33_10340 |
| L2 | JNIIIPNH_01026 | B1L07_04670 | AOT14_RS05350 | F0P98_RS12890 | F0P95_RS08575 | ABB33_03240 |
| GES-1 | JNIIIPNH_00474 | – | – | – | – | – |
| ampR | JNIIIPNH_01025 | B1L07_04665 | AOT14_RS05345 | F0P98_RS12895 | F0P95_RS08570 | ABB33_02800 |
| ampN | JNIIIPNH_00207 | B1L07_01060 | AOT14_RS02770 | F0P98_RS01145 | F0P95_RS04785 | ABB33_12865 |
| ampG | JNIIIPNH_00208 | B1L07_01065 | AOT14_RS02775 | F0P98_RS01150 | F0P95_RS04790 | ABB33_12870 |
| ampD | JNIIIPNH_02390 | B1L07_01310 | AOT14_RS11925 | F0P98_RS06020 | F0P95_RS14375 | ABB33_06015 |
| mrcA | JNIIIPNH_02778 | B1L07_01315 | AOT14_RS13800 | F0P98_RS04120 | F0P95_RS16525 | ABB33_04710 |
| mrdA | JNIIIPNH_00607 | B1L07_02815 | AOT14_RS03340 | F0P98_RS14735 | F0P95_RS06700 | – |
| Aminoglycoside resistance gene | ||||||
| aadA3 | JNIIIPNH_01525 | – | – | – | – | – |
| Efflux pump | ||||||
| smeDEF RND system | ||||||
| sme D | JNIIIPNH_01709 | B1L07_07555 | AOT14_RS08230 | F0P98_RS14800 | F0P95_RS06630 | ABB33_10360 |
| sme E | JNIIIPNH_01710 | B1L07_07560 | AOT14_RS08235 | F0P98_RS14795 | F0P95_RS06635 | ABB33_10365 |
| sme F | JNIIIPNH_01712 | B1L07_07570 | AOT14_RS08245 | F0P98_RS05900 | F0P95_RS14485 | ABB33_10375 |
| smeOP-TolC RND system | ||||||
| tolC | JNIIIPNH_00706 | B1L07_03300 | AOT14_RS03825 | F0P98_RS14240 | F0P95_RS07185 | ABB33_09990 |
| pcm | JNIIIPNH_00707 | B1L07_03305 | AOT14_RS03830 | F0P98_RS14235 | F0P95_RS07190 | ABB33_09985 |
| smeO | JNIIIPNH_00709 | B1L07_03315 | AOT14_RS03840 | F0P98_RS04655 | F0P95_RS16015 | ABB33_09950 |
| smeP | JNIIIPNH_00710 | B1L07_03320 | AOT14_RS03845 | F0P98_RS14220 | F0P95_RS07205 | ABB33_09945 |
| SMR efflux pump | ||||||
| qacL | JNIIIPNH_01527 | – | – | – | – | – |
| MFS efflux pump | ||||||
| cmlA5 | JNIIIPNH_01526 | – | – | – | – | – |
| tetC | JNIIIPNH_01532 | – | – | F0P98_RS10910 | F0P95_RS03755 | – |