Table 1.
Pathogen | Target gene | Primer name | Sequence | Size (bp) | Reference |
---|---|---|---|---|---|
Rickettsia spp. | 17-kD | R-r17k1-F | TTTACAAAATTCTAAAAACCAT | 539 | (Ishikura et al., 2003) |
R-r17k539-R | TCAATTCACAACTTGCCATT | ||||
R-r17k90-F | GCTCTTGCAACTTCTATGTT | 450 | |||
R-r17k539-R | TCAATTCACAACTTGCCATT | ||||
ompA | R-r190k.71p | TGGCGAATATTTCTCCAAAA | 650 | (Ishikura et al., 2003) | |
R-r190k.720n | TGCATTTGTATTACCTATTGT | ||||
R-r190k.71p | TGGCGAATATTTCTCCAAAA | 532 | |||
R-r190k.602n | AGTGCAGCATTCGCTCCCCCT | ||||
ompB | Rc.rompB.4362p | GTCAGCGTTACTTCTTCGATGC | 475 | (Choi et al., 2005) | |
Rc.rompB.4,836n | CCGTACTCCATCTTAGCATCAG | ||||
Rc.rompB.4,496p | CCAATGGCAGGACTTAGCTACT | 267 | |||
Rc.rompB.4,762n | AGGCTGGCTGATACACGGAGTAA | ||||
sca4 | R-sca4-1072F | TCGGTTGAACCACCTCAGCATA | 711 | (Li et al., 2020) | |
R-sca4-1782R | TGTGCCGGACTGAGAACTTGGA | ||||
R-sca4-1146F | GGCTTCACAAATGCCACAGTCG | 389 | |||
R-sca4-1154R | TCTGCTGTTTTTGCTGCGGCTC | ||||
Rickettsia felis | gltA | Rfelis-gltA-F1 | GCAAGTATTGGTGAGGATGTAATC | 886 | (Hii et al., 2011) |
Rfelis-gltA-R1 | CTGCGGCACGTGGGTCATAG | ||||
Rfelis-gltA-F2 | GCGACATCGAGGATATGACAT | 654 | |||
Rfelis-gltA-R2 | GGAATATTCTCAGAACTACCG | ||||
felB* | RfelB-F | TAATTTTAACGGAACAGACGGT | 97 | (Phomjareet et al., 2020) | |
RfelB-R | GCCTAAACTTCCTGTAACATTAAAG | ||||
RfelB-P | FAM-TGCTGCTGGTGGCGGTGCTA-BHQ |
*Real-time PCR method.