TABLE 2.
Summary of the assembly and annotation characteristics of the 20 whole-genome sequenced strains belonging to eight OTUs.
| Strains | Total assembly size (bp) | Number of contigs | Number of chromosomes | Chromosome size (Mb) | Number of plasmids | Plasmids size (Kb) | G + C content (%) | Number of genes | Number of CDSs (coding) | rRNA | tRNA | Number of CDSs with assigned function | Number of CDSs without assigned function |
| OTU2_Pfu_1 | 93,57,004 | 6 | 2 | 4.78 + 3.53 | 4 | 435 + 295 + 228 + 84 | 62% | 8624 | 8465 | 12 | 74 | 5384 (63.6%) | 3081 (36.4%) |
| OTU2_Pfu_2 | 91,20,800 | 4 | 2 | 4.94 + 3.58 | 2 | 447 + 147 | 62% | 8329 | 8171 | 12 | 71 | 5313 (65.0%) | 2858 (35.0%) |
| OTU2_Pfu_3 | 91,22,278 | 4 | 2 | 4.94 + 3.59 | 2 | 447 + 147 | 62% | 8327 | 8169 | 12 | 71 | 5313 (65.0%) | 2856 (35.0%) |
| OTU3a_Oxa_1 | 74,81,272 | 1 | 1 | 7.48 | 0 | 64% | 6337 | 6208 | 14 | 86 | 3969 (63.9%) | 2239 (36.0%) | |
| OTU3a_Oxa_2 | 76,93,415 | 1 | 1 | 7.69 | 0 | 64% | 6514 | 6382 | 14 | 89 | 4055 (63.5%) | 2327 (36.46%) | |
| OTU3b_Oxa_1 | 68,68,374 | 1 | 1 | 6.87 | 0 | 64% | 5935 | 5795 | 14 | 97 | 3657 (63.1%) | 2138 (36.9%) | |
| OTU4_Com_1 | 46,55,332 | 5 | 1 | 3.29 | 4 | 493 + 424 + 290 + 159 | 70% | 4268 | 4183 | 6 | 53 | 2842 (67.9%) | 1341 (32.1%) |
| OTU5_Pmo_1 | 60,04,654 | 1 | 1 | 6.00 | 0 | 60% | 5446 | 5272 | 16 | 72 | 3526 (66.9%) | 1746 (33.1%) | |
| OTU5_Pmo_2 | 59,69,148 | 1 | 1 | 5.97 | 0 | 60% | 5412 | 5238 | 16 | 71 | 3502 (66.9%) | 1736 (33.1%) | |
| OTU5_Pmo_3 | 59,80,820 | 1 | 1 | 5.98 | 0 | 60% | 5416 | 5242 | 16 | 70 | 3528 (67.3%) | 1714 (32.7%) | |
| OTU6_Psi_1 | 59,88,833 | 1 | 1 | 5.99 | 0 | 60% | 5458 | 5282 | 16 | 73 | 3539 (67.0%) | 1743 (33.0%) | |
| OTU6_Psi_2 | 60,05,098 | 1 | 1 | 6.00 | 0 | 60% | 5401 | 5227 | 16 | 72 | 3520 (67.5%) | 1697 (32.5%) | |
| OTU6_Psi_3 | 59,86,784 | 1 | 1 | 5.99 | 0 | 60% | 5431 | 5258 | 16 | 71 | 3522 (67.0%) | 1736 (33.0%) | |
| OTU6_Psi_4 | 59,15,411 | 1 | 1 | 5.91 | 0 | 60% | 5377 | 5205 | 16 | 73 | 3513 (67.5%) | 1692 (32.5%) | |
| OTU6_Psi_5 | 60,95,266 | 2 | 1 | 5.99 | 1 | 103 | 60% | 5597 | 5422 | 16 | 74 | 3562 (65.7%) | 1860 (34.3%) |
| OTU6_Psi_6 | 59,18,345 | 1 | 1 | 5.92 | 0 | 60% | 5423 | 5247 | 16 | 75 | 3510 (66.9%) | 1737 (33.1%) | |
| OTU13_Msp_1 | 50,74,646 | 5 | 1 | 4.90 | 4 | 56 + 42 + 40 + 38 | 69% | 4903 | 4800 | 15 | 64 | 2608 (54.3%) | 2192 (45.7%) |
| OTU29_Sph_1 | 38,10,917 | 3 | 1 | 3.62 | 2 | 126 + 65 | 66% | 3629 | 3551 | 9 | 55 | 2103 (59.2%) | 1448 (40.8%) |
| OTU29_Sph_2 | 38,25,112 | 2 | 1 | 3.76 | 1 | 65 | 66% | 3610 | 3532 | 9 | 56 | 2128 (60.2%) | 1404 (39.8%) |
| OTU29_Sph_3 | 41,27,732 | 2 | 1 | 4.00 | 1 | 74 | 66% | 3931 | 3851 | 9 | 58 | 2258 (58.6%) | 1593 (41.4%) |