TABLE 4.
Genetic variation among eight Arabidopsis thaliana accessions in response to 22 bacterial strains inoculated at the seedling stage in in vitro conditions.
| Accession |
Treatment |
Time |
Accession × Treatment |
Treatment × Time |
Accession × Time |
Treatment × Accession × Time |
||||||||
| Strains | F-value | P | F-value | P | F-value | P | F-value | P | F-value | P | F-value | P | F-value | P |
| OTU2_Pfu_1 | 12.23 | 0.0001 | 0.94 | 0.4579 | 24.29 | 0.0001 | 1.25 | 0.3994 | 0.86 | 0.9002 | 0.56 | 1 | 0.28 | 1 |
| OTU2_Pfu_2 | 9.78 | 0.0001 | 1.63 | 0.3534 | 28.75 | 0.0001 | 1.25 | 0.3994 | 1.45 | 0.9002 | 0.38 | 1 | 0.29 | 1 |
| OTU2_Pfu_3 | 7.82 | 0.0001 | 0.99 | 0.4579 | 18.07 | 0.0001 | 3.16 | 0.0082 | 0.26 | 0.9617 | 0.60 | 1 | 0.40 | 1 |
| OTU3a_Oxa_1 | 4.75 | 0.0001 | 4.80 | 0.0856 | 24.31 | 0.0001 | 1.21 | 0.4059 | 0.94 | 0.9002 | 0.47 | 1 | 0.52 | 1 |
| OTU3a_Oxa_2 | 3.28 | 0.0019 | 0.28 | 0.6957 | 22.00 | 0.0001 | 2.49 | 0.0381 | 1.70 | 0.9002 | 1.15 | 1 | 0.51 | 1 |
| OTU3b_Oxa_1 | 13.43 | 0.0001 | 1.08 | 0.4579 | 18.48 | 0.0001 | 3.67 | 0.0026 | 0.23 | 0.9617 | 0.66 | 1 | 0.64 | 1 |
| OTU3b_Oxa_2 | 9.23 | 0.0001 | 0.15 | 0.7356 | 16.28 | 0.0001 | 0.86 | 0.5926 | 0.16 | 0.9655 | 0.28 | 1 | 0.35 | 1 |
| OTU4_Com_1 | 15.32 | 0.0001 | 6.10 | 0.0418 | 22.66 | 0.0001 | 1.98 | 0.1094 | 0.54 | 0.9002 | 0.39 | 1 | 0.22 | 1 |
| OTU5_Pmo_1 | 10.69 | 0.0001 | 0.79 | 0.4953 | 21.91 | 0.0001 | 0.41 | 0.8976 | 0.35 | 0.9617 | 0.45 | 1 | 0.35 | 1 |
| OTU5_Pmo_2 | 6.27 | 0.0001 | 0.01 | 0.9301 | 16.20 | 0.0001 | 4.22 | 0.0006 | 0.07 | 0.9779 | 0.19 | 1 | 0.57 | 1 |
| OTU5_Pmo_3 | 11.78 | 0.0001 | 6.64 | 0.0418 | 25.77 | 0.0001 | 1.03 | 0.4714 | 1.03 | 0.9002 | 0.88 | 1 | 0.17 | 1 |
| OTU6_Psi_1 | 13.46 | 0.0001 | 0.16 | 0.7356 | 21.28 | 0.0001 | 5.65 | 0.0006 | 0.30 | 0.9617 | 0.38 | 1 | 0.43 | 1 |
| OTU6_Psi_2 | 9.07 | 0.0001 | 19.23 | 0.0022 | 31.73 | 0.0001 | 1.07 | 0.4714 | 1.89 | 0.9002 | 0.37 | 1 | 0.44 | 1 |
| OTU6_Psi_3 | 11.17 | 0.0001 | 8.25 | 0.0242 | 28.53 | 0.0001 | 2.51 | 0.0381 | 1.26 | 0.9002 | 0.34 | 1 | 0.54 | 1 |
| OTU6_Psi_4 | 6.58 | 0.0001 | 13.68 | 0.0044 | 24.45 | 0.0001 | 1.91 | 0.1183 | 0.61 | 0.9002 | 0.61 | 1 | 0.20 | 1 |
| OTU6_Psi_5 | 8.36 | 0.0001 | 4.01 | 0.0864 | 24.47 | 0.0001 | 2.42 | 0.0400 | 1.02 | 0.9002 | 0.56 | 1 | 0.15 | 1 |
| OTU6_Psi_6 | 9.84 | 0.0001 | 7.16 | 0.0348 | 25.13 | 0.0001 | 5.34 | 0.0006 | 0.94 | 0.9002 | 0.70 | 1 | 0.57 | 1 |
| OTU13_Msp_1 | 18.31 | 0.0001 | 4.14 | 0.0856 | 26.07 | 0.0001 | 4.70 | 0.0006 | 0.66 | 0.9002 | 0.68 | 1 | 0.47 | 1 |
| OTU13_Msp_2 | 9.32 | 0.0001 | 6.28 | 0.0418 | 25.29 | 0.0001 | 0.61 | 0.7871 | 0.57 | 0.9002 | 0.40 | 1 | 0.32 | 1 |
| OTU29_Sph_1 | 8.75 | 0.0001 | 8.95 | 0.0295 | 26.51 | 0.0001 | 1.37 | 0.3618 | 0.96 | 0.9002 | 0.41 | 1 | 0.23 | 1 |
| OTU29_Sph_2 | 10.00 | 0.0001 | 0.54 | 0.5676 | 23.83 | 0.0001 | 3.32 | 0.0062 | 0.65 | 0.9002 | 1.05 | 1 | 0.41 | 1 |
| OTU29_Sph_3 | 12.37 | 0.0001 | 12.80 | 0.0044 | 27.49 | 0.0001 | 1.04 | 0.4714 | 1.29 | 0.9002 | 0.54 | 1 | 0.19 | 1 |
The statistical term “Treatment” corresponds to the effect of each bacterial strain in comparison with the mock treatment. Bold values indicate significant p-values after a False Discover Rate (FDR) correction at a nominal level of 5%.