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. Author manuscript; available in PMC: 2022 Oct 7.
Published in final edited form as: Methods Mol Biol. 2022;2474:133–145. doi: 10.1007/978-1-0716-2213-1_13

Table 4.

Compound activity outcome assignments based on multi-channel assay readouts (a) multi-channel fluorescence agonist mode assay (b) multi-channel fluorescence antagonist mode assay (c) luminescence antagonist mode assay with cytotoxicity counter screen

(a)
*Ratio outcome Signal channel outcome Same reporter assay promiscuity Auto fluorescence outcome Activity outcome
inactive N/A N/A N/A inactive
inconclusive N/A N/A N/A inconclusive
active agonist agonist average curve rank ≤4 inactive or AC50 fluor/AC50 signal ≥3 active agonist
inconclusive agonist agonist average curve rank ≤4 inactive or AC50 fluor/AC50 signal ≥3 inconclusive agonist
agonist agonist average curve rank >4 agonist and AC50 fluor/AC50 signal <3 inconclusive agonist (fluorescent)
active antagonist antagonist N/A N/A active antagonist
inconclusive antagonist antagonist N/A N/A inconclusive antagonist
(b)
*Ratio outcome Signal channel outcome Cell viability outcome Other conditions Activity outcome
inactive N/A N/A N/A inactive
inconclusive N/A N/A N/A inconclusive
active agonist agonist inactive or agonist N/A active agonist
active agonist agonist antagonist AC50 viability/AC50 signal ≥3 (p<0.05) active agonist
inconclusive agonist agonist N/A N/A inconclusive agonist
agonist agonist antagonist AC50 viability/AC50 signal <3 or p≥0.05 inconclusive agonist (cytotoxic)
active antagonist antagonist inactive or agonist N/A active antagonist
active antagonist antagonist antagonist AC50 viability/AC50 signal ≥3 (p<0.05) active antagonist
inconclusive antagonist antagonist N/A N/A inconclusive antagonist
antagonist antagonist antagonist AC50 viability/AC50 signal <3 or p≥0.05 inconclusive antagonist (cytotoxic)
(c)
Signal channel outcome Cell viability outcome Other conditions Activity outcome
inactive N/A N/A inactive
inconclusive N/A N/A inconclusive
active agonist inactive or agonist N/A active agonist
active agonist antagonist AC50 viability/AC50 signal ≥3 (p<0.05) active agonist
inconclusive agonist N/A N/A inconclusive agonist
agonist antagonist AC50 viability/AC50 signal <3 or p≥0.05 inconclusive agonist (cytotoxic)
active antagonist inactive or agonist N/A active antagonist
active antagonist antagonist AC50 viability/AC50 signal ≥3 (p<0.05) active antagonist
inconclusive antagonist N/A N/A inconclusive antagonist
antagonist antagonist AC50 viability/AC50 signal <3 or p≥0.05 inconclusive antagonist (cytotoxic)
*

Ratio = signal channel/control channel

Abbreviations: AC50 fluor = AC50 in the auto fluorescence assay, AC50 signal = AC50 in the ratio channel

*

Ratio = signal channel/control channel

Abbreviations: AC50 viability = AC50 in the cell viability assay, AC50 signal = AC50 in the ratio channel

Abbreviations: AC50 viability = AC50 in the cell viability assay, AC50 signal = AC50 in the antagonist mode assay