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. 2022 Jul 17;31(16):4208–4223. doi: 10.1111/mec.16577

FIGURE 2.

FIGURE 2

Population‐ and phylogenomic analyses of genome‐wide nuclear SNP (3743) data for 46 cheetah individuals. (a) PCA analysis of all individuals of the five classical subspecies included in this study. The clustering corresponds to the morphological subspecies classification. (b) Phylogenetic relationships of representatives of the five classical cheetah subspecies using genetic distances (estimated using ngsDist and FastME; using 100 bootstraps). (c) Phylogenetic relationships of representatives for the five classical cheetah subspecies inferred by the phylogenetic network approach implemented in SplitsTree. For a fully annotated phylogenetic network see Figure S3.