Table 7.
GO-related genes.
| Path name | Related genes | log P value | Number of genes |
|---|---|---|---|
| GOBP:0033674-positiveregulationofkinaseacti vity (positive regulation of kinase activity) | AKT 1, CCND 1, BRAF, DRD2, EGFR, F2, FGFR1, MTOR, HRAS, IL1B, MAPT, NTRK1, PIK3CA, PSEN 1, PTPN11, RET, TLR4, TNF, VEGFA, DKK1, APP, AR, ICAM1, IL6,CASP3,GRIN1,MMP9,STAT3,CREBBP,EP300,TP53,NLRP3 | −20.2989 | 20 |
| GOBP:0051091-positive regulation of DNA-binding transcription factor activity (positive regulation of DNA-binding transcription factor activity) | AKT 1,APP,AR,CTNNB1,EP300,ICAM1,IL1B,IL6,NTRK1,PPARG,SHH,STAT3,TLR4,TNF,VEGFA,NLRP3,ADA,MTOR,MMP9,PSEN1,TP53,CASP3,DRD2,HRAS,NOS3 | −20.183 | 16 |
| GOBP:0010035-responsetoinorganicsubstance (response to inorganic substances) | ADA,AKT 1,APP,CCND1,BRAF,CASP3,DRD2,EGFR,ICAM1,IL6,MAPT,MMP9,MPO,NOS3,NTRK1,PIK3CA,SHH,TNF,VCP | −19.667 | 19 |
| GOBP:0048708-astrocytedifferentiation | APP,EGFR,F2,IL6,MAPT,PSEN1,PTPN11,SHH,STAT3,TLR4,TNF,AKT1,MTOR,PPARG,IL1B,CREBBP,CTNNB1,DRD2,EP300,HRAS,SERPINE1,NLRP3,CCND1,MMP9,TP53, VEGFA, DKK1, TRPV4, NOS2, AR, ICAM1, NTRK1, ADA, FGFR1, MPO | −18.4275 | 11 |
| GOBP:0071214-cellularresponsetoabioticstimulus (cellular responses to abiotic stimuli) | AKT 1, CASP 3, CREBBP, EGFR, EP300, HRAS, IL1B, MME, MMP9, PIK3CA, PTPN11, SLC2A1, TLR4, TP53, TRPV4, APP, CCND1, DRD2, MTOR, GRIN1, ICAM1, NTRK1 | −17.0184 | 15 |
| GOBP:0009612-responsetomechanicalstimulus (mechanical stimulus response) | AKT 1, CTNNB 1, DRD2, EGFR, IL1B, MPO, NTRK1, PIK3CA, PPARG, PTPN11, SLC2A1, TLR4, TRPV4, MTOR, ICAM1, TP53, STAT3, IL6, AR, EP300, SHH | −16.7189 | 13 |
| GOBP:2000379-positiveregulationofreactiveoxygenspeciesmetabolicprocess | AKT 1,EGFR,F2,MTOR,GRIN1,ICAM1,IL1B,MAPT,TLR4,TNF,TP53,MPO,NOS2,NOS3,AR,CASP3,EP300,FGFR1,HRAS,MMP9,SERPINE1,PSEN1,RET,SHH,IL6,NLRP3,PPARG,COMT,DRD2,BRAF,PTPN11,SLC2A1 | −16.6247 | 11 |
| GOBP:0050769-positiveregulationofneurogenesis (positive regulation of neurogenesis) | CTNNB 1, DRD 2, EP300, FGFR1, MTOR, IL1B, IL6, MAPT, MME, NTRK1, PPARG, PSEN1, RET, SHH, TNF, VEGFA, NOS3 | −16.3266 | 16 |
| GOBP:0071417-cellularresponsetoorganonitrogencompound (cellular response to organic nitrogen compounds) | AKT 1,APP,CASP3,CTNNB1,MTOR,GRIN1,ICAM1,IL1B,NTRK1,PIK3CA,PPARG,PSEN1,PTPN11,STAT3,TLR4,TNF,TP53,MMP9,SLC2A1,HRAS | −16.1496 | 17 |
| GOBP:0007610-behavior (behavior) | ADA,APP,CASP3,DRD2,EGFR,EP300,MTOR,GRIN1,MAPT,MME,NTRK1,PSEN1,SCN9A,STAT3,TP53,DKK1,TNF,HRAS,IL1B,AKT1,VCP,BRAF | −15.2434 | 16 |
| GOCC: 0045121-membraneraft (membrane raft) | APP, CASP 3, EGFR, ICAM1, MAPT, MME, NOS3, PSEN1, RET, SHH, SLC2A1, TNF | −12.5371 | 12 |
| GOCC: 0031983-vesiclelumen (vesicle) | ADA,APP,EGFR,IDH1,MPO,SERPINE1,TTR,VCP,VEGFA | −8.17746 | 9 |
| GOCC:0030425-dendrite (dendrite) | ADA,APP,COMT,DRD2,MTOR,GRIN1,MAPT,MME,NTRK1,PSEN1,RET,SCN9A,TRPV4,CASP3,SLC2A1,AKT1 | −8.17229 | 11 |
| GOCC:0005769-earlyendosome (early endosome) | APP, ASAH 1, EGFR, MME, NTRK1, PSEN1, RET, TLR4, DKK1, FGFR1, GRIN1, IL6, PPARG | −7.71136 | 9 |
| GOCC:0048471-perinuclearregionofcytoplasm (perinuclear region of cytoplasm) | APP, CTNNB 1, EGFR, HRAS, NOS2, PIK3CA, PPARG, PSEN1, TLR4, VCP | −6.42261 | 10 |
| GOCC:0000139-Golgimembrane (Golgi Membrane) | APP, DRD 2, EGFR, MTOR, HRAS, NOS3, NTRK1, PSEN1, SLC2A1, NLRP3, MPO, CCND1 | −6.13667 | 10 |
| GOCC:0099568-cytoplasmicregion | ADA, CTNNB 1, MAPT, NOS2, PSEN1, SLC2A1, TRPV4, APP, EGFR | −4.58327 | 7 |
| GOCC:0000323-lyticvacuole (dissolving vacuole) | ADA,ASAH1,MTOR,IL1B,MPO,PSEN1,TTR,VCP | −4.56545 | 8 |
| GOCC:0005667-transc riptionfactorcomplex | CREBBP, CTNNB 1, EP300, PPAR G, STAT3, TP53 | −4.54877 | 6 |
| GOCC:0098797-plasmamembraneproteincomplex (plasma membrane protein complex) | CASP 3, CTNNB 1, EGFR, GRIN1, IL6, PSEN1, RET, SCN9A | −4.53493 | 8 |
| GOMF:0019903-proteinphosphatasebinding | AKT 1, CTNNB 1, EGFR, MAPT, PPARG, STAT3, TP53, VCP, CCND1, MTOR, NTRK1, PTPN11, SLC2A1, TRPV4 | −9.73956 | 8 |
| GOMF:0001085-RNApolymeraseIItranscriptionfactorbinding | AR,CREBBP,CTNNB1,EP300,PPARG,STAT3,TP53,CCND1,MTOR,NLRP3,EGFR,MPO,PSEN1,PTPN11,HRAS | −8.24381 | 7 |
| GOMF:0019904-proteindomainspecificbinding | APP,AR,MTOR,IL1B,MAPT,PPARG,PSEN1,PTPN11,TP53,VCP,TRPV4 | −7.65201 | 11 |
| GOMF:0005539-glycosaminoglycanbinding | APP,F2,FGFR1,MPO,SHH,VEGFA,NLRP3 | −6.8449 | 7 |
| GOMF:0030545-receptorregulatoractivity | APP, F2, IL1B, IL6, SHH, TNF, TTR, VEGFA, DKK1, PSEN1, CASP3, NTRK1 | −6.4776 | 9 |
| GOMF:0005516-calmodulinbinding | AKT 1,EGFR,GRIN1,NOS2,NOS3,TRPV4,IDH1,PPARG,MPO | −5.91203 | 6 |
| GOMF:0016773-phosphotransferaseactivity,alcoholgroupasacceptor(phosphotransferase activity, alcohol group as acceptor) | AKT 1, CCND 1, BRAF, EGFR, FGFR1, MTOR, NTRK1, PIK3CA, RET | −5.74733 | 9 |
| GOMF:0002020-proteasebinding | CASP 3, SERPINE 1, TNF, TP53, VCP, APP | −5.48413 | 5 |
| GOMF:0008289-lipidbinding | ,AR,F2, MAPT,MME,PPARG,TLR4,VCP,TRPV4,GRIN1 | −5.1262 | 9 |
| GOMF:0042803-proteinhomodimerizationactivity | AKT 1, FGFR 1, IDH1, MME, NOS2, NTRK1, STAT3, VEGFA | −4.73268 | 8 |
GO = Gene ontology.