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. 2022 May 10;111(1):304–315. doi: 10.1111/tpj.15779

Figure 3.

Figure 3

Schematic of the translating ribosome affinity purification (TRAP) workflow.

(a) Tissue from transiently transformed Nicotiana benthamiana or stably transformed Arabidopsis was collected, flash‐frozen, and homogenized with extraction buffer. Clarification of the homogenate via centrifugation yielded the clarified leaf extract (CLE), containing all soluble proteins.

(b) Polysome concentration was achieved by ultracentrifugation of CLE over a sucrose cushion followed by resuspension, yielding the sucrose cushion ultracentrifugation pellet (SUP) containing all protein complexes with sufficient density to penetrate the cushion. Note that this step was omitted from the experiments with transgenic Arabidopsis. (c) Immunopurification of tagged polyribosomes from either CLE (Arabidopsis) or SUP (N. benthamiana) employed FLAG beads to yield immunoprecipitated (IP) polysomes. [Colour figure can be viewed at wileyonlinelibrary.com]