TABLE 2.
Primer name a | Primer sequence (excluding adapters) b | Amplicon size (excluding adapters) |
---|---|---|
mtCO1 gene‐specific primers | ||
Wfly‐PCR‐F1 | TGGTTYTTTGGTCATCCRGAAG | 645 bp |
Wfly‐PCR‐R1 | GGAAARAAWGTTAARTTWACTCC | |
Wfly‐PCR‐F2 | CGRGCTTAYTTYACTTCAGCYAC | 663 bp |
Wfly‐PCR‐R2 | GGYTTATTRATTTTYCAYTCTA | |
ace1 gene‐specific primers | ||
Bt‐ace‐F | TAGGGATCTGCGACTTCCC | 287 bp |
Bt‐ace‐R | GTTCAGCCAGTCCGTGTACT | |
vgsc gene‐specific primers | ||
Bt‐kdr‐F1 | GCCAAATCCTGGCCAACT | 184 bp |
Bt‐kdr‐Rintr1 | GAGACAAAAGTCCTGTAGC |
Specific primers for the partial amplification of mtCO1, ace1 and vgsc genes.
Given gene‐specific primer sequences are attached to the linker sequences (in bold) when ordering which Illumina adapters [i5] and [i7] are attached to the linker sequences during the second amplification step 5′‐[i5]TCGTCGGCAGCGTCAGATGTGTATAAGAGACAG ‐3′ and 5′‐[i7]GTCTCGTGGGCTCGGAGATGTGTATAAGAGACAG ‐3′. ([i5] and [i7] are Nextera index sequences). Underlined sequences are recognition sites for trimming the adapter sequences during analysis steps (Illumina). Wfly‐PCR‐F1/R1 and Wfly‐PCR‐F2/R2 primers were the same as reported previously. 14