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. 2022 May 30;76(8):361–366. doi: 10.1111/pcn.13372

Table 2.

Results of mendelian randomization analysis

EAS EUR
Trait Method No. of SNPs beta SE P‐value q‐value No. of SNPs beta SE P‐value q‐value
BMI Inverse variance weighted 62 −0.211 0.113 0.0617 0.434 298 −0.165 0.0654 0.0116 0.0514
Weighted median 62 −0.135 0.115 0.241 0.530 298 −0.125 0.0727 0.0860 0.229
MR Egger 62 0.178 0.364 0.625 0.772 298 0.280 0.191 0.142 0.341
MR‐PRESSO 60 −0.125 0.0949 0.192 0.530 278 −0.140 0.0561 0.0134 0.0514
Egger intercept 0.264 0.0135
CRP Inverse variance weighted 6 −0.0530 0.141 0.706 0.795 183 −0.0923 0.0378 0.0146 0.0514
Weighted median 6 −0.0920 0.143 0.520 0.772 183 −0.109 0.0422 0.0100 0.0514
MR Egger 6 0.197 0.342 0.596 0.772 183 −0.0602 0.0530 0.258 0.442
MR‐PRESSO 6 NA NA NA 176 −0.101 0.0332 2.79E−03 0.0514
Egger intercept 0.465 0.389
HDL‐C Inverse variance weighted 50 0.0756 0.0364 0.0379 0.431 247 0.0412 0.0387 0.287 0.459
Weighted median 50 0.0567 0.0543 0.296 0.530 247 −0.0184 0.0439 0.674 0.887
MR Egger 50 −6.90E−03 0.0656 0.917 0.917 247 −0.0786 0.0559 0.161 0.351
MR‐PRESSO 50 NA NA NA 235 0.0406 0.0323 0.209 0.386
Egger intercept 0.139 2.00E−03 3.68E−03
BS Inverse variance weighted 15 −0.117 0.105 0.265 0.530 93 −0.135 0.0726 0.0629 0.189
Weighted median 15 −0.145 0.141 0.303 0.530 93 −0.0485 0.0694 0.485 0.728
MR Egger 15 −0.124 0.529 0.818 0.859 93 −0.0421 0.118 0.723 0.887
MR‐PRESSO 15 NA NA NA 86 −0.126 0.0503 0.0144 0.0514
Egger intercept 0.989 0.321
TGs Inverse variance weighted 36 −0.0469 0.0625 0.452 0.730 204 −0.0143 0.0428 0.739 0.887
Weighted median 36 −0.0960 0.0671 0.152 0.530 204 −0.0208 0.0444 0.640 0.887
MR Egger 36 −0.207 0.0975 0.0409 0.431 204 0.0825 0.0616 0.182 0.364
MR‐PRESSO 34 −0.0626 0.0564 0.275 0.530 192 6.83E03 0.0340 0.841 0.910
Egger intercept 0.0452 0.0316
SBP Inverse variance weighted 22 0.207 0.164 0.206 0.530 158 −0.0134 0.0831 0.872 0.910
Weighted median 22 0.0794 0.161 0.623 0.772 158 0.0212 0.0846 0.802 0.910
MR Egger 22 0.987 0.574 0.101 0.530 158 0.702 0.268 9.56E03 0.0514
MR‐PRESSO 21 0.0416 0.114 0.719 0.795 153 −5.01E03 0.0687 0.942 0.942
Egger intercept 0.172 5.65E−03

Bold numbers represent results for prioritized analysis based on the significance of Egger intercept (if P > 0.05, we prioritized the “inverse variance–weighted” method, whereas if P < 0.05, we prioritized other methods).

Mendelian randomization (MR) pleiotropy residual sum and outlier (MR‐PRESSO) beta effects were calculated after removing the outliers, which were pleiotropic variants. If there was no outlier, we described “NA” in the column. The number of single nucleotide polymorphism (SNPs) in MR‐PRESSO was that after removing the outliers.

BMI, body mass index; BS, blood sugar; CRP, C‐reactive protein; EAS, East Asian; EUR, European; HDL‐C, high‐density lipoprotein cholesterol; SBP, systolic blood pressure; SE, standard error; TGs, triglycerides.