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. 2019 Jul 15;99(6):1242–1253. doi: 10.1111/tpj.14413

Table 1.

Illumina sequencing data after quality filtering as input for assembly (a) and assembly results (b) for Beta patula and B.v. maritima

(a)
  Input data
Beta patula Beta vulgaris ssp. maritima
Insert size (kbp) Filtered pairs (million) Insert size (kbp) Filtered pairs (million)
Paired‐end 0.6 336 0.6* 390
Mate‐pair 2.5 56 2.5* 30
4 17 2.5 41
5 58 5* 35
6 27 5 42
9 28 10 22
(b)
  Assembly results
Beta patula Beta vulgaris ssp. maritima
Total size 624 Mbp 590 Mbp
Sequences ≥ 500 bp 41 354 28 626
N50 size 271 kbp 176 kbp
N50 number 654 887
N90 size 20 kbp 24 kbp
N90 number 2905 4177
Avg. seq. length 15 kbp 21 kbp
Longest sequence 1.68 Mbp 2.42 Mbp

Asterisks refer to data sets generated with previous work (Capistrano‐Gossmann et al., 2017). In (b), only scaffolds and contigs of length 500 bp or larger were considered.