Table 2.
Differential expression of genes involved in phenylethanol glycosides biosynthesis
| Gene Name | Gene ID | YS1 FPKM | HS2 FPKM | Relative expression level (HS2/YS1) | Reference sequence ID | Expression Trend (HS2/YS1) | |
|---|---|---|---|---|---|---|---|
| log2 Ratio | Q-value | ||||||
| PAL | isoform_210146 | 145.88 | 2.42 | -5.97 | 1.55E-202 | XP_011077338.1 | down |
| isoform_21374 | 80.55 | 19.09 | -2.14 | 2.08E-22 | XP_011094662.1 | down | |
| isoform_213767 | 181.18 | 47.18 | -1.96 | 6.18E-06 | XP_011077338.1 | down | |
| C4H | isoform_15343 | 3.26 | 0.18 | -3.04 | 4.37E-02 | XP_012838100.1 | down |
| isoform_189636 | 1.86 | 0.51 | -1.86 | 6.77E-03 | XP_011089529.1 | down | |
| C3H | isoform_76310 | 10.86 | 0 | -8.12 | 1.64E-13 | AYK02617.1 | down |
| isoform_14095 | 0.21 | 21.79 | 3.59 | 2.58E-02 | AYK02607.1 | up | |
| isoform_10016 | 329.53 | 62.13 | -2.47 | 2.07E-36 | AYK02617.1 | down | |
| isoform_15416 | 90.54 | 13.28 | -2.78 | 1.62E-11 | AYK02617.1 | down | |
| isoform_16568 | 11.08 | 0.00 | -9.16 | 1.57E-22 | AYK02607.1 | down | |
| CSE | isoform_18401 | 19.24 | 2.36 | -2.95 | 2.97E-06 | XP_012857987.1 | down |
| isoform_27751 | 3.35 | 28.57 | 3.02 | 7.62E-86 | XP_012834726.1 | up | |
| isoform_28866 | 19.68 | 0.00 | -9.48 | 1.15E-24 | XP_012834726.1 | down | |
| isoform_25302 | 49.96 | 0.21 | -4.35 | 3.68E-03 | XP_011094308.1 | down | |
| isoform_48623 | 17.34 | 0.00 | -8.60 | 7.32E-19 | XP_012834726.1 | down | |
| CYP98A3 | isoform_12445 | 12.08 | 29.56 | 1.18 | 5.07E-02 | BBB04707.1 | up |
| isoform_189832 | 3.71 | 9.58 | 1.25 | 9.76E-03 | BBB04707.1 | up | |
| HCT | isoform_196971 | 5.12 | 1.29 | -1.99 | 3.28E-03 | PIN19717.1 | down |
| isoform_31973 | 24.55 | 7.77 | -1.68 | 1.04E-03 | XP_011094024.1 | down | |
| isoform_122217 | 27.55 | 2.90 | -2.88 | 6.93E-03 | XP_011094024.1 | down | |
| 4CL | isoform_8492 | 164.34 | 13.85 | -3.62 | 3.24E-78 | XP_012858335.1 | down |
| isoform_11132 | 28.86 | 15.40 | -0.98 | 1.12E-07 | XP_011089239.2 | down | |
| isoform_10866 | 41.06 | 11.32 | -1.93 | 1.09E-17 | AHL44986.1 | down | |
| isoform_11864 | 1.54 | 66.17 | 5.29 | 2.27E-63 | XP_011099557.1 | up | |
| isoform_118069 | 11.42 | 1.00 | -3.04 | 8.73E-03 | XP_011084613.1 | down | |
| COMT | isoform_25614 | 19.56 | 0.00 | -9.25 | 2.38E-21 | XP_011075886.2 | down |
| isoform_223053 | 17.12 | 2.58 | -2.68 | 6.79E-05 | XP_010671879.1 | down | |
| isoform_231223 | 0.00 | 23.19 | 8.56 | 8.71E-19 | Q9XGW0.1 | up | |
| isoform_204033 | 0.00 | 30.23 | 9.66 | 5.90E-25 | XP_011075886.2 | up | |
| CCoAOMT | isoform_35877 | 46.86 | 26.87 | -0.87 | 1.25E-03 | XP_012836932.1 | down |
| isoform_35990 | 2.16 | 32.00 | 3.74 | 1.11E-16 | XP_012836932.1 | up | |
| isoform_230149 | 2.60 | 83.89 | 3.26 | 3.89E-02 | XP_011088234.1 | up | |
| F5H | isoform_13346 | 69.06 | 17.82 | -1.97 | 1.36E-06 | XP_011090419.1 | down |
| PER | isoform_34903 | 88.04 | 19.92 | -2.20 | 4.44E-23 | XP_011083218.1 | down |
| isoform_27857 | 89.01 | 10.27 | -2.91 | 4.61E-04 | PIN17935.1 | down | |
| isoform_203664 | 204.81 | 26.53 | -2.92 | 2.96E-10 | PIN15750.1 | down | |
| isoform_25272 | 9.65 | 27.98 | 1.44 | 1.29E-06 | PIN17427.1 | up | |
| CCR | isoform_32104 | 0.00 | 30.72 | 9.77 | 2.00E-26 | XP_011090120.1 | up |
| isoform_91788 | 0.00 | 14.99 | 9.29 | 2.45E-23 | XP_011090120.1 | up | |
| CAD | isoform_183598 | 1.18 | 16.03 | 3.69 | 8.09E-04 | ADD23217.1 | up |
| isoform_174357 | 1.57 | 193.62 | 5.50 | 4.11E-25 | ADD23217.1 | up | |
| isoform_107090 | 1.09 | 26.79 | 4.12 | 1.09E-06 | ADD23217.1 | up | |
| isoform_231316 | 24.34 | 0.00 | -8.72 | 1.35E-06 | ADD23217.1 | down | |
| isoform_228655 | 135.49 | 0.35 | -8.45 | 5.73E-19 | ADD23217.1 | down | |
| AADC | isoform_74329 | 11.29 | 6.03 | -0.98 | 2.12E-03 | PIN14702.1 | down |
| isoform_15697 | 300.25 | 44.24 | -2.82 | 8.99E-66 | PIN03085.1 | down | |
| TyDC | isoform_74329 | 11.29 | 6.03 | -0.98 | 2.12E-03 | PIN14702.1 | down |
| isoform_15697 | 300.25 | 44.24 | -2.82 | 8.99E-66 | PIN03085.1 | down | |
| GOT | isoform_101670 | 1.41 | 4.71 | 1.66 | 1.76E-07 | XP_012831009.1 | up |
| isoform_13249 | 4.54 | 2.07 | -1.19 | 8.57E-04 | XP_011090466.1 | down | |
| isoform_14711 | 30.70 | 75.40 | 1.22 | 4.16E-35 | XP_012847157.1 | up | |
| isoform_17258 | 57.87 | 28.08 | -1.12 | 4.77E-12 | XP_011090466.1 | down | |
| CuAO | isoform_75943 | 11.47 | 2.24 | -2.36 | 1.56E-05 | PIN02817.1 | down |
| isoform_237680 | 11.46 | 5.86 | -1.04 | 5.44E-05 | PIN02817.1 | down | |
| isoform_4039 | 474.68 | 0.02 | -13.49 | 3.48E-114 | PIN02817.1 | down | |
| isoform_4504 | 90.89 | 33.39 | -1.50 | 2.40E-04 | PIN02817.1 | down | |
| PPO | isoform_219247 | 941.05 | 142.61 | -2.79 | 6.16E-128 | XP_011083298.1 | down |
| isoform_130337 | 16.14 | 0.34 | -5.51 | 1.84E-29 | PIN00359.1 | down | |
| isoform_10940 | 265.38 | 37.65 | -2.89 | 1.67E-137 | PIN14145.1 | down | |
| isoform_220219 | 6.26 | 18.68 | 1.50 | 3.74E-05 | XP_011082857.1 | up | |
| isoform_207237 | 30.46 | 89.54 | 1.46 | 3.57E-05 | XP_011082857.1 | up | |
| AADH | isoform_27810 | 23.93 | 2.94 | -3.05 | 2.67E-16 | XP_012829622.1 | down |
| isoform_27930 | 111.87 | 49.22 | -1.26 | 3.29E-44 | XP_011069785.1 | down | |
| isoform_18708 | 34.06 | 74.95 | 1.06 | 2.89E-10 | PIN17974.1 | up | |
| isoform_158788 | 1.39 | 14.55 | 3.30 | 6.20E-08 | PIM99059.1 | up | |
| UGT | isoform_18212 | 19.15 | 6.30 | -1.66 | 6.95E-14 | PIN26543.1 | down |
| isoform_155690 | 25.81 | 5.93 | -2.20 | 2.55E-46 | PIN10984.1 | down | |
| isoform_131960 | 33.88 | 14.92 | -1.25 | 2.67E-06 | PIN15726.1 | down | |
| isoform_215583 | 63.33 | 13.82 | -2.2 | 3.27E-06 | PIN22174.1 | down | |
| isoform_17110 | 22.52 | 136.97 | 2.44 | 6.52E-06 | PIN07918.1 | up | |