Cloning of mutS and flanking DNA from the
chromosome of Acinetobacter sp. strain ADP1. Small arrows
indicate the degenerate primers MUTSF2 (F) and MUTSR3 (R) used for PCR
amplification of a 1.9-kb segment of mutS. Shaded regions
indicate this portion of mutS throughout the figure. Strain
ADP7003 was formed by integration of pZR7000 into the chromosome of
strain ADP1. pGEM-3Zf(+) does not replicate in strain ADP1, so
selection for ampicillin resistance (apr), encoded on the
vector, demanded strain ADP7003. Digestion of chromosomal DNA from
strain ADP7003 with EcoRI yielded a fragment containing
pGEM-3Zf(+) fused to a segment of upstream DNA that included the 5′ end
of mutS, and chromosomal DNA extending to the first
EcoRI site upstream of the gene. Circularization of the
restriction fragments by ligation followed by transformation into
E. coli DH5α and selection for Apr resulted in
pZR7009. The 3′ end of mutS and downstream DNA were cloned
in the same manner except that ADP7003 DNA was digested with
BamHI rather than EcoRI, and the resulting
plasmid was designated pZR1010.