Table 2:
Contiguity and completeness statistics of all available chromosome-level assembled chelonian genomes.
| Species name (Accession No.) | Family | Genome size (Gbp) | Contig N50 (Mbp) | Scaffold N50 (Mbp) | BUSCO completeness* |
|---|---|---|---|---|---|
| Aldabrachelys gigantea (this study) | Testudinidae | 2.374 | 61.5 | 148.6 | 97.3% [S: 96.2%, D: 1.1%], F: 0.4%, M: 2.3% |
| Gopherus evgoodei (GCF_007399415.2) | Testudinidae | 2.299 | 13.027 | 147.4 | 97% [S: 95.9, D: 1.1%], F: 0.5%, M: 2.5% |
| Chelonia mydas (GCF_015237465.2) | Cheloniidae | 2.134 | 39.416 | 134.4 | 97.3% [S: 96.3%, D: 1.0%], F: 0.4%, M: 2.3% |
| Dermochelys coriacea (GCF_009764565.3) | Dermochelyidae | 2.165 | 7.03 | 137.6 | 96.3% [S: 95.3%, D: 1.0%], F: 0.6%, M: 3.1% |
| Chrysemys picta bellii (GCF_000241765.4) | Emydidae | 2.481 | 0.021 | 16 | 96.6% [S: 95.7%, D: 0.9%], F: 1.1%, M: 2.3% |
| Trachemys scripta elegans (GCF_013100865.1) | Emydidae | 2.126 | 0.205 | 140.4 | 95.0% [S: 94.0%, D: 1.0%], F: 1.2%, M: 3.8% |
| Mauremys mutica (GCF_020497125.1) | Geoemydidae | 2.484 | 15.011 | 135 | 97.3%[S: 95.2%, D: 2.1%], F: 0.5%, M: 2.2% |
| Mauremys reevesii (GCF_016161935.1) | Geoemydidae | 2.368 | 33.353 | 130.5 | 97.5% [S: 95.9%, D: 1.6%], F: 0.4%, M: 2.1% |
| Rafetus swinhoei (GCA_019425775.1) | Trionychidae | 2.238 | 30.964 | 132 | 96.4% [S: 95.3%, D: 1.1%], F: 0.6%, M: 3.0% |
*
BUSCO score generated from the sauropsid (sauropsida_odb10) database. BUSCO statistics: C, complete; D, duplicated; F, fragmented; M, missing; S, single copy.