Table 3.
Predicting the growth of model iSR1310 on different media based on phenotypic data.
| Growth condition | Observed normal growth | Simulated growth | Prediction class |
|---|---|---|---|
| Carbon-D-fructose | 0 | 0 | CN |
| Carbon-D-galactose | 1 | 1 | CP |
| Carbon-D-arabinose | 1 | 1 | CP |
| Carbon-D-trehalose | 1 | 1 | CP |
| Carbon-D-mannitol | 1 | 1 | CP |
| Carbon-D-mannose | 1 | 1 | CP |
| Carbon-D-raffinose | 0 | 0 | CN |
| Carbon-D-xylose | 1 | 1 | CP |
| Carbon-L-arabitol | 1 | 1 | CP |
| Carbon-L-rhamnose | 0 | 0 | CN |
| Carbon-D-glucose | 1 | 1 | CP |
| Carbon-a-D-lactose | 0 | 0 | CP |
| Carbon-starch | 1 | 1 | CP |
| Carbon-sorbitol | 1 | 1 | CP |
| Nitrogen-L-tyrosine | 1 | 1 | CP |
| Nitrogen-urea | 1 | 1 | CP |
| Nitrogen-L-phenylalanine | 1 | 1 | CP |
| Nitrogen-L-histidine | 1 | 1 | CP |
| Nitrogen-D-valine | 0 | 0 | CN |
| Nitrogen-xanthine | 0 | 0 | CN |
| Nitrogen-hypoxanthine | 1 | 0 | FN |
| Nitrogen-casein | 1 | 0 | FN |
| Nitrogen-nitrate | 1 | 1 | CP |
1, growth; 0, no growth; CP, correct positions; CN, correct negatives; FP, false positions: FN, false negatives.