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. 2022 Oct 12;22:266. doi: 10.1186/s12906-022-03742-7

Table 2.

The binding energy and interacting amino acid residues of the PfLDH with compounds from M. siamensis

Compound Binding energy
(kcal/mol)
H-bond interaction Hydrophobic interaction
Number of
interaction
Amino acid residues Number of
interaction
Amino acid residues
Lupeol (1) -7.21 - 6 ILE54**, VAL55**, PHE100, ILE119
4,5-Dihydroxy-3-methoxylxanthone (2) -7.14 4 PHE100, ASN140*, SER245 6 VAL138, LEU167, ALA236, PRO246*, PRO250
4-Hydroxyxanthone (3) -6.31 1 TYR85 6 VAL26, PHE52, ILE54, ALA98, ILE119*
1,7-Dihydroxyxanthone (4) -7.17 3 PHE100, ASN140, SER245 4 ILE31, VAL138, THR139, PRO250
β-sitosterol (5) -6.45 1 PRO246 6 THR101*, LEU167, PRO246, PRO250*
Stigmasterol (5) -6.64 2 ARG109, ARG171 10 MET30, ILE31*, ILE54*, ALA98, THR101, ILE119**
Mammea A/AA cyclo D (6) -7.02 1 GLY29 7 PHE52, ILE54*, VAL55, ALA98, ILE119*
Mammea A/AA cyclo F (7) -7.16 2 THR97, ASN140 8 MET30, ILE31*, THR101, THR139, ASN140, LEU167, PRO250
1,6-Dihydroxyxanthone (8) -7.09 4 ASP53, ILE54, TYR85, GLU122 8 VAL26, PHE52*, ASP53, ILE54, ALA98, ILE119*
1-Hydroxy-5,6,7-trimethoxyxanthone (9) -7.35 4 ARG109, ASN140*, ARG171 6 VAL26, PHE52, ILE54, ALA98, ILE119, ILE123
3,4,5-Trihydroxyxanthone (10) -7.25 5 PHE100*, ASN140*, SER245 4 VAL138, LEU167, PRO246, PRO250
5-Hydroxy-1-methoxyxanthone (11) -7.01 2 ILE54, TYR85 8 VAL26, PHE52, ILE54*, ALA98, ILE119*, ILE123
2-Hydroxyxanthone (12) -6.14 2 PHE100, ASN140 4 ILE31, VAL138, THR139, PRO250
1,5-Dihydroxy-6-methoxyxanthone (13) -7.14 3 ILE54, TYR85, ILE199 10 VAL26, PHE52*, ASP53, ILE54*, ALA98, ILE119*, ILE123
Artesunate -8.57 7 GLY29, ILE31, GLY32, ILE54*, THR97, GLY99 9 VAL26, ILE31, ILE54, ALA98*, THR101, ILE119*
Chloroquine -6.26 1 GLY99 6 VAL26, ILE31*, PHE52, THR101, ILE119

*Two interactions with amino acid residues

**Three interactions with amino acid residues