Skip to main content
. 2022 Sep 28;10:968341. doi: 10.3389/fcell.2022.968341

TABLE 1.

Parameters used for simulation.

Parameter Physical interpretation Value Units Reference
X Total length in horizontal direction 10 Mm -
dx X steps 0.067 Mm -
Y Total length in vertical direction 5 (no flux base)/8 (PDMS base) mm -
dy Y steps 0.033 (no flux base)/0.053 (PDMS base) mm -
T Total time 1800 sec -
dt Time step 0.075 sec -
[O2]ambient Oxygen partial pressure in percentage in ambient 5/20.9 % -
Dsolution Diffusion coefficient of oxygen in solution 2.0 × 10–5 cm2 s−1
DPDMS Diffusion coefficient of oxygen in PDMS 4.0 × 10–5 cm2 s−1
Depoxy Diffusion coefficient of oxygen in epoxy 4.9 × 10–7 cm2 s−1 Chowdhury et al. (2016)
Dpolystyrene Diffusion coefficient of oxygen in polystyrene 1.7 × 10–7 cm2 s−1 Ghosal and Freeman (1994)
X_pdms Thickness of the PDMS wall in x direction 2 mm -
Y_pdms Thickness of the PDMS base 3 mm -
X_elec length of the electrode 7 (half)/14 (full) mm -
Y_E_pos Position of the scavenging electrode from the base 1–3 mm -
Boundary Boundary conditions
Centre of well Symmetric boundary condition
Air-solution interface Dirichlet boundary condition (Fixed concentration boundary, [O2] = [O2]ambient)
Glass, polystyrene, epoxy interface Neumann boundary condition (No flux boundary)
Electrode polarized to reduce oxygen Dirichlet boundary condition (Fixed concentration boundary, [O2] = 0)