TABLE 4.

Distributions of superior and inferior alleles for the six significant single nucleotide polymorphisms associated with Fusarium crown rot resistance.

SNP	Allele type		Panel	Allele number		Allele frequency (%)		Phenotype value		Difference (%)	Significance
	Superior	Inferior		Superior	Inferior	Superior	Inferior	Superior	Inferior
GB5Y7FA01DPZQ3	G	A	ALL	56	230	19.58	80.42	32.41 ± 8.22	37.3 ± 8.14	15.09	**
			T-group	56	115	32.75	67.25	32.41 ± 8.22	37.75 ± 9.02	16.48	**
			S-group	0	115	0.00	100.00	–	36.84 ± 7.11	–	–
GA8KES401CURCG	T	C	ALL	129	157	45.10	54.90	34.6 ± 8.14	37.77 ± 8.3	9.16	**
			T-group	118	53	69.01	30.99	34.63 ± 8.37	39.07 ± 9.92	12.82	**
			S-group	11	104	9.57	90.43	34.26 ± 4.9	37.11 ± 7.26	8.32	ns
GDRF1KQ02F6UYY	A	G	ALL	135	151	47.20	52.80	34.59 ± 8.47	37.9 ± 7.98	9.57	**
			T-group	116	55	67.84	32.16	34.73 ± 8.87	38.7 ± 9.04	11.43	**
			S-group	19	96	16.52	83.48	33.73 ± 5.32	37.45 ± 7.26	11.03	*
GBQ4KXB01BSGDP	G	A	ALL	45	241	15.73	84.27	32.21 ± 7.4	37.11 ± 8.32	15.21	**
			T-group	45	126	26.32	73.68	32.21 ± 7.4	37.36 ± 9.28	15.99	**
			S-group	0	115	0.00	100.00	–	36.84 ± 7.11	–	–
GB5Y7FA01B2L7A	C	T	ALL	45	241	15.73	84.27	32.21 ± 7.4	37.11 ± 8.32	15.21	**
			T-group	45	126	26.32	73.68	32.21 ± 7.4	37.36 ± 9.28	15.99	**
			S-group	0	115	0.00	100.00	–	36.84 ± 7.11	–	–
GA8KES402HI5B7	T	C	ALL	104	182	36.36	63.64	33.98 ± 8.34	37.69 ± 8.1	10.92	**
			T-group	100	71	58.48	41.52	33.97 ± 8.45	38.88 ± 9.25	14.45	**
			S-group	4	111	3.48	96.52	34.31 ± 4.82	36.93 ± 7.17	7.64	ns

**Significant at P < 0.01; ns, not significant; “–” data unavailable.