Table 1.
NADnet pathway reactions to gene, enzyme, and Factor mappings information.
No. | Reaction ID | Gene | Enzyme name | EC | Reaction | Factor |
---|---|---|---|---|---|---|
1 | J1 | TDO2, IDO2, IDO1 | Tryptophan 2,3-dioxygenase | 1.13.11.11 | L-Tryptophan + O2 = N-Formyl-L-kynurenine | F1 |
2 | J2 | AFMID | Formylkynurenine formamidase | 3.5.1.9 | N-Formyl-L-kynurenine + H2O = Formate + L-Kynurenine | F2 |
3 | J3 | KMO | Kynurenine 3-hydroxylase | 1.14.13.9 | L-Kynurenine + NADPH + H+ + O2 = 3-Hydroxy-L-kynurenine + NADP+ + H2O | F3 |
4 | J4 | KYNU | Kynureninase | 3.7.1.3 | 3-Hydroxy-L-kynurenine + H2O = 3-Hydroxyanthranilate + L-Alanine | F4 |
5 | J5 | HAAO | 3-Hydroxyanthranilate 3,4-dioxygenase | 1.13.11.6 | 3-Hydroxyanthranilate + O2 = 2-Amino-3-carboxymuconate semialdehyde → Quinolinate | F5 |
6 | J6 | QPRT | Quinolinate phosphoribosyltransferase | 2.4.2.19 | Quinolinate + PRPP = NMN + PPi + CO2 | F6 |
7 | J7 | NMNAT1, NMNAT2, NMNAT3 | NMN adenylyltransferase | 2.7.7.1 | NaMN + ATP = NaAD+ + PPi | F7 |
8 | J8 | NMNAT1, NMNAT2, NMNAT3 | NMN adenylyltransferase | 2.7.7.1 | NMN + ATP = NAD+ + PPi | F8 |
9 | J9 | NADSYN1 | NAD+ synthetase (glutamine-hydrolyzing) | 6.3.5.1 | NaAD+ + ATP + L-Gln + H2O = NAD+ + AMP + PPi + L-Glu | F9 |
10 | J10 | NADSYN1 | NAD+ synthetase (ammonia-dependent) | 6.3.1.5 | NaAD+ + ATP + NH3 = NAD+ + AMP + PPi | F10 |
11 | J11 | NADK | NAD+ kinase | 2.7.1.23 | NAD+ + ATP = NADP+ + ADP | F11 |
12 | J12 | BST1, CD38 | NAD+ glycohydrolase | 3.2.2.5 | NAD+ + H2O = Nicotinamide + ADP-ribose | F12 |
13 | J13 | BST1, CD38 | NAD(P)+ nucleosidase | 3.2.2.6 | NAD(P)++ H2O = Nicotinamide + ADP-ribose(2¢-phosphate) | F13 |
14 | J14 | PARP1 | Poly (ADP-ribose) polymerase | 2.4.2.30 | NAD+ + (ADP-ribose) n = Nicotinamide + (ADP-ribose) n+1 | F14 |
15 | J15 | ART3, ART4, ART5, SIRT6 | Mono ADPribosyltransferase | 2.4.2.31 | NAD ++ L-Arg = Nicotinamide + N(2)-(ADP-ribosyl)-L-Arg | F15 |
16 | J16 | ENPP1, ENPP3 | NAD+ pyrophosphatase | 3.6.1.22 | NAD+ + H2O = AMP + NMN | F16 |
17 | J17 | NAMPT | Nicotinamide phosphoribosyltransferase | 2.4.2.12 | Nicotinamide + PRPP = NMN + PPi | F17 |
18 | J18 | NT5E, NT5C1A, NT5C2 | 5’-Nucleotidase | 3.1.3.5 | NMN + H2O = Nicotinamide riboside + P | F18 |
19 | J19 | PNP | Nicotinamide nucleoside phosphorylase | 2.4.2.1 | Nicotinamide riboside + P = Nicotinamide + R-1-P | F19 |
20 | J20 | NMRK1 | Ribosylnicotinamide kinase | 2.7.1.22 | ATP + Nicotinamide riboside = ADP + NMN | F20 |
21 | J22 | NAPRT | Nicotinate phosphoribosyltransferase | 2.4.2.11 | Nicotinate + PRPP = NaMN + PPi | F22 |