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. 2022 Oct 1;23(19):11624. doi: 10.3390/ijms231911624

Figure 1.

Figure 1

An overview of Seq2Neo. The input of Seq2Neo includes raw WGS, WES, RNA-seq or peptide information. Seq2Neo predicts various peptide features, including CNN-based immunogenicity score, peptide–HLA binding affinity, TAP transport efficiency and gene expression. Then, Seq2Neo uses those features to rank candidate neoantigens.