Table 5.
Gene ontology analysis of clustered QTL for alkaline stress responsive traits.
| QTL Clusters a | Total No. of Genes | No. of Genes Annotated | Annotated Genes (%) | Numbers of Significant Ontology Terms | ||
|---|---|---|---|---|---|---|
| Biological Process | Cellular Components | Molecular Function | ||||
| qAKT3.03, qRNK3.03, qSNK3.03 | 26 | 8 | 31 | 18 | 6 | 3 |
| qAKT5.008, qSKC5.008 | 4 | 2 | 50 | 2 | 0 | 0 |
| qAKT8.002, qCHL8.002, qSNC8.002, qRNC8.002, qSKC8.002, qRKC8.002, qSNK8.002, qRNK8.002 | 37 | 26 | 70 | 31 | 13 | 6 |
| qAKT9.19, qSNC9.19, qRNC9.19, qRKC9.19, qSNK9.19, qRNK9.19 | 59 | 37 | 63 | 35 | 16 | 8 |
| qAKT10.18, qSKC10.18 | 187 | 109 | 58 | 48 | 9 | 2 |
| qSNC12.19, qRNC12.19 | 33 | 16 | 48 | 19 | 14 | 6 |
| qSNC4.16, qRNK4.16 | 26 | 14 | 54 | 13 | 5 | 4 |
a AKT, alkalinity tolerance scoring; CHL, chlorophyll content; SHL, shoot length; RTL, root length; RSR, root-to-shoot ratio; SNC, shoot Na+ concentration; SKC, shoot K+ concentration; RNC, root Na+ concentration; RKC, root K+ concentration; SNK, shoot Na+: K+ ratio; RNK, root Na+:K+ ratio.