| DCR | Defective in Cuticular Ridges |
| OX | Over expression |
| TF | Transcription factor |
| DEGs | Differentially Expressed Genes |
| KEGG | Kyoto Encyclopedia of Genes and Genomes |
| ALDH7B4 | Aldehyde dehydrogenase |
| CAT | Catalase-related immune-responsive |
| UGT | UDP-glucoronosyl and UDP-glucosyl transferase |
| WRKY | WRKY DNA-binding domain |
| SAG | Protein phosphatase 2C |
| 4CL | 4-coumarate CoA ligase |
| CHI | Chalcone-flavanone isomerase |
| LODX | Leucoanthocyanidin dioxygenase |
| FPKM | Fragments per kb per million |
| ERF | Apetala2/ethylene response factor |
| NDK | Nucleoside diphosphate kinase |
| NCBI | Non-redundant protein database |
| SPSS | Statistical Package for the Social Sciences |
| FW | Fresh Weight |
| AHP | Histidine-containing phosphor-transmitters |
| GH3.5 | GH3 auxin-responsive promoter |
| PYL | Abscisic acid receptor PYL6 |
| SPCH | Basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NIT2 | Carbon-nitrogen hydrolase |
| MS | MS media (Murashige–Skoog) |
| WT | Wild type |
| ETR | Response regulator receiver domain |
| 1AA | Auxin |
| GA | Gibberellin |
| ARR | Arabidopsis Response regulator receiver |
| PER | Peroxidase |
| PAL | Phenylalanine ammonia-lyase |
| CCR | Regulator of chromosome condensation |
| PCL | Primary congenital lymphedema |
| bHLH | Basic helix-loop-helix DNA-binding domain |
| CGA | Chlorogenic Acid |
| CHS | Chalcone and stilbene synthases |
| NDK | Nucleoside diphosphate kinase |
| PCA | Principal component analysis |
| ERS | His Kinase A (phospho-acceptor) domain |
| GSTF12 | Glutathione S-transferase F12 |
| 3AT | anthocyanin acyltransferase |
| GO | Gene Ontology |
| CCOAMT | O-methyltransferase |
| SAUR | Small auxin upregulated RNAs |
| CYP | Cytochrome P450 |
| BGLU | Glycosyl hydrolase |
| CAD | Cinnamyl alcohol dehydrogenase |
| MYB | A regulatory factor in anthocyanin production |