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. 2022 Sep 28;65(19):13029–13040. doi: 10.1021/acs.jmedchem.2c00877

Table 2. Permeabilities for PROTACs 1–3a.

PROTAC CRBN (cell) IC50 (μM) CRBN (bio) IC50 (μM) CRBN, ratio cell/biob PAMPA (−log Pe, cm/s) Ppassivec (nm/s)
1 0.924 ± 0.119 0.244 ± 0.028 4 6.56 ± 004 30 ± 1.5
2 16.9 ± 1.41 1.41 ± 0.207 12 n.d.d 11 ± 1.7
3 18.0 ± 2.07 0.667 ± 0.066 27 >7.37 6 ± 1.4
a

The potencies for binding to CRBN are mean values ± SEM from five or six repeats. PAMPA data are mean values ± SEM from three repeats. Permeabilities across Caco-2 cell monolayers are mean values ± SEM from two or three repeats.

b

Highly permeable PROTACs have a low cell/bio ratio, while the opposite is true for low-permeable ones.

c

Passive permeability (Ppassive) across Caco-2 cell monolayers at pH 7.4 was calculated as the geometric mean of Papp AB and Papp BA (Table S1), i.e. Ppassive = (PappAB × PappBA)0.5.

d

Not determined.