Table 1.
Correlation analysis between GXYLT2 and relate genes and markers of immune cells in TIMER.
| Description | Gene markers | None | Purity | ||
|---|---|---|---|---|---|
| Cor | p | Cor | p | ||
| CD8+ T cell | CD8A | 0.353 | ∗∗∗ | 0.134 | ∗ |
| CD8B | 0.305 | ∗∗∗ | 0.156 | ∗∗ | |
|
| |||||
| T cell (general) | CD3D | 0.298 | ∗∗∗ | 0.03 | 0.561 |
| CD3E | 0.403 | ∗∗∗ | 0.133 | ∗ | |
| CD2 | 0.389 | ∗∗∗ | 0.126 | ∗ | |
|
| |||||
| B cell | CD19 | 0.381 | ∗∗∗ | 0.185 | ∗∗∗ |
| CD79A | 0.405 | ∗∗∗ | 0.187 | ∗∗∗ | |
|
| |||||
| Monocyte | CD86 | 0.575 | ∗∗∗ | 0.386 | ∗∗∗ |
| CD115 (CSF1R) | 0.656 | ∗∗∗ | 0.502 | ∗∗∗ | |
|
| |||||
| TAM | CCL2 | 0.574 | ∗∗∗ | 0.411 | ∗∗∗ |
| CD68 | 0.406 | ∗∗∗ | 0.228 | ∗∗∗ | |
| IL10 | 0.619 | ∗∗∗ | 0.488 | ∗∗∗ | |
|
| |||||
| M1 macrophage | INOS (NOS2) | 0.174 | ∗∗∗ | 0.131 | ∗ |
| IRF5 | -0.107 | ∗ | -0.105 | ∗ | |
| COX2 (PTGS2) | 0.127 | ∗ | 0.031 | 0.549 | |
|
| |||||
| M2 macrophage | CD163 | 0.693 | ∗∗∗ | 0.565 | ∗∗∗ |
| VSIG4 | 0.679 | ∗∗∗ | 0.537 | ∗∗∗ | |
| MS4A4A | 0.668 | ∗∗∗ | 0.531 | ∗∗∗ | |
|
| |||||
| Neutrophils | CD66b (CEACAM8) | 0.02 | 0.683 | 0.047 | 0.372 |
| CD11b (ITGAM) | 0.638 | ∗∗∗ | 0.485 | ∗∗∗ | |
| CCR7 | 0.044 | 0.378 | -0.06 | 0.254 | |
|
| |||||
| Natural killer cell | KIR2DL1 | 0.221 | ∗∗∗ | 0.081 | 0.122 |
| KIR2DL3 | 0.229 | ∗∗∗ | 0.057 | 0.278 | |
| KIR2DL4 | 0.21 | ∗∗∗ | 0.026 | 0.619 | |
| KIR3DL1 | 0.196 | ∗∗∗ | 0.067 | 0.201 | |
| KIR3DL2 | 0.18 | ∗∗∗ | 0.031 | 0.558 | |
| KIR3DL3 | 0.031 | 0.53 | -0.014 | 0.794 | |
| KIR2DS4 | 0.18 | ∗∗∗ | 0.04 | 0.439 | |
|
| |||||
| Dendritic cell | HLA-DPB1 | 0.513 | ∗∗∗ | 0.309 | ∗∗∗ |
| HLA-DQB1 | 0.431 | ∗∗∗ | 0.225 | ∗∗∗ | |
| HLA-DRA | 0.451 | ∗∗∗ | 0.243 | ∗∗∗ | |
| HLA-DPA1 | 0.469 | ∗∗∗ | 0.278 | ∗∗∗ | |
| BDCA-1 (CD1C) | 0.266 | ∗∗∗ | 0.082 | 0.117 | |
| BDCA-4 (NRP1) | 0.48 | ∗∗∗ | 0.38 | ∗∗∗ | |
| CD11c (ITGAX) | 0.641 | ∗∗∗ | 0.479 | ∗∗∗ | |
|
| |||||
| Th1 | T-bet (TBX21) | 0.375 | ∗∗∗ | 0.143 | ∗∗ |
| STAT4 | 0.435 | ∗∗∗ | 0.206 | ∗∗∗ | |
| STAT1 | 0.335 | ∗∗∗ | 0.156 | ∗∗ | |
| IFN-γ (IFNG) | 0.272 | ∗∗∗ | 0.089 | 0.0891 | |
| TNF-α (TNF) | 0.282 | ∗∗∗ | 0.16 | ∗∗ | |
|
| |||||
| Th2 | GATA3 | -0.387 | ∗∗∗ | -0.266 | ∗∗∗ |
| STAT6 | -0.179 | ∗∗∗ | -0.125 | ∗ | |
| STAT5A | 0.28 | ∗∗∗ | 0.122 | ∗ | |
| IL13 | 0.185 | ∗∗∗ | 0.041 | 0.434 | |
|
| |||||
| Tfh | BCL6 | -0.109 | ∗∗∗ | -0.08 | 0.125 |
| IL21 | 0.172 | ∗∗∗ | 0.092 | 0.0782 | |
|
| |||||
| Th17 | STAT3 | 0.393 | ∗∗∗ | 0.273 | ∗∗∗ |
| IL17A | -0.098 | ∗ | -0.157 | ∗∗ | |
|
| |||||
| Treg | FOXP3 | 0.446 | ∗∗∗ | 0.277 | ∗∗∗ |
| CCR8 | 0.45 | ∗∗∗ | 0.297 | ∗∗∗ | |
| STAT5B | 0.214 | ∗∗∗ | 0.226 | ∗∗∗ | |
| TGFβ (TGFB1) | 0.357 | ∗∗∗ | 0.261 | ∗∗∗ | |
|
| |||||
| T cell exhaustion | PD-1 (PDCD1) | 0.394 | ∗∗∗ | 0.17 | ∗∗ |
| CTLA4 | 0.391 | ∗∗∗ | 0.168 | ∗∗ | |
| LAG3 | 0.394 | ∗∗∗ | 0.186 | ∗∗∗ | |
| TIM-3 (HAVCR2) | 0.602 | ∗∗∗ | 0.42 | ∗∗∗ | |
| GZMB | 0.369 | ∗∗∗ | 0.118 | ∗ | |
p < 0.05 was considered to be statistically significant (∗p < 0.05, ∗∗p < 0.01, and ∗∗∗p < 0.001).