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. 2022 Oct 18;11:e77373. doi: 10.7554/eLife.77373

Table 2. Hyper-parameters, OBB, ROC-AUC, and confusion matrix of donor-specific random forests models.

Donor (no. of data points) ntree mtry OOB (%) ROC-AUC TP FP FN TN
A (170) 100 4 24.41 0.740 39 18 13 57
B (155) 150 2 38.79 0.650 28 27 18 43
C (232) 250 3 32.18 0.813 67 29 27 51
D (199) 400 4 10.07 0.968 76 5 10 58
E (179) 250 1 19.40 0.854 58 9 17 50
F (212) 250 1 26.42 0.801 101 2 40 16

ntree, number of trees; mtry, number of variables selected for the best split at each node; OBB, out-of-bag error; ROC-AUC, area under receiver operating characteristics curve; TP, true positive; FP, false positive; FN, false negative; TN, true negative.